Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
KRT6AP02538 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
KRT6AP02538 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
KRT6AP02538 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.11■□□□□ 0.97
KRT6AP02538 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.11■□□□□ 0.97
KRT6AP02538 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
KRT6AP02538 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.11■□□□□ 0.97
KRT6AP02538 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
KRT6AP02538 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
KRT6AP02538 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
KRT6AP02538 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.11■□□□□ 0.97
KRT6AP02538 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
KRT6AP02538 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.11■□□□□ 0.97
KRT6AP02538 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.11■□□□□ 0.97
KRT6AP02538 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.11■□□□□ 0.97
KRT6AP02538 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
KRT6AP02538 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
KRT6AP02538 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
KRT6AP02538 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
KRT6AP02538 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.1■□□□□ 0.97
KRT6AP02538 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
KRT6AP02538 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
KRT6AP02538 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
KRT6AP02538 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
KRT6AP02538 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.1■□□□□ 0.97
KRT6AP02538 CA15P2-201ENST00000611168 834 ntBASIC21.1■□□□□ 0.97
KRT6AP02538 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.1■□□□□ 0.97
KRT6AP02538 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
KRT6AP02538 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
KRT6AP02538 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.09■□□□□ 0.97
KRT6AP02538 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
KRT6AP02538 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
KRT6AP02538 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
KRT6AP02538 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.09■□□□□ 0.97
KRT6AP02538 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
KRT6AP02538 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
KRT6AP02538 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
KRT6AP02538 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
KRT6AP02538 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.09■□□□□ 0.97
KRT6AP02538 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
KRT6AP02538 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
KRT6AP02538 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
KRT6AP02538 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.08■□□□□ 0.97
KRT6AP02538 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.08■□□□□ 0.97
KRT6AP02538 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
KRT6AP02538 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
KRT6AP02538 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
KRT6AP02538 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
KRT6AP02538 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.08■□□□□ 0.97
KRT6AP02538 MIR3621-201ENST00000580529 85 ntBASIC21.08■□□□□ 0.97
KRT6AP02538 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.08■□□□□ 0.97
KRT6AP02538 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
KRT6AP02538 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
KRT6AP02538 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
KRT6AP02538 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.08■□□□□ 0.96
KRT6AP02538 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.96
KRT6AP02538 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.08■□□□□ 0.96
KRT6AP02538 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
KRT6AP02538 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.08■□□□□ 0.96
KRT6AP02538 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
KRT6AP02538 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
KRT6AP02538 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
KRT6AP02538 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
KRT6AP02538 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
KRT6AP02538 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.07■□□□□ 0.96
KRT6AP02538 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.07■□□□□ 0.96
KRT6AP02538 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
KRT6AP02538 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.07■□□□□ 0.96
KRT6AP02538 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
KRT6AP02538 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
KRT6AP02538 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.06■□□□□ 0.96
KRT6AP02538 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
KRT6AP02538 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
KRT6AP02538 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.06■□□□□ 0.96
KRT6AP02538 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
KRT6AP02538 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
KRT6AP02538 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
KRT6AP02538 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
KRT6AP02538 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
KRT6AP02538 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.06■□□□□ 0.96
KRT6AP02538 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
KRT6AP02538 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.06■□□□□ 0.96
KRT6AP02538 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
KRT6AP02538 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
KRT6AP02538 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
KRT6AP02538 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
KRT6AP02538 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
KRT6AP02538 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
KRT6AP02538 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
KRT6AP02538 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.06■□□□□ 0.96
KRT6AP02538 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
KRT6AP02538 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
KRT6AP02538 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.05■□□□□ 0.96
KRT6AP02538 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.05■□□□□ 0.96
KRT6AP02538 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
KRT6AP02538 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
KRT6AP02538 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.05■□□□□ 0.96
KRT6AP02538 pRNA.6-201ENST00000610482 90 ntBASIC21.05■□□□□ 0.96
KRT6AP02538 pRNA.5-201ENST00000612139 90 ntBASIC21.05■□□□□ 0.96
KRT6AP02538 pRNA.11-201ENST00000618423 90 ntBASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms