Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
SIX6O95475 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SIX6O95475 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SIX6O95475 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.23■□□□□ 0.51
SIX6O95475 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SIX6O95475 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SIX6O95475 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SIX6O95475 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.23■□□□□ 0.51
SIX6O95475 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
SIX6O95475 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
SIX6O95475 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
SIX6O95475 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SIX6O95475 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.23■□□□□ 0.51
SIX6O95475 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SIX6O95475 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SIX6O95475 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SIX6O95475 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SIX6O95475 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SIX6O95475 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
SIX6O95475 LINC01006-201ENST00000333319 2292 ntBASIC18.23■□□□□ 0.51
SIX6O95475 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SIX6O95475 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
SIX6O95475 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.22■□□□□ 0.51
SIX6O95475 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SIX6O95475 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
SIX6O95475 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SIX6O95475 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SIX6O95475 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.22■□□□□ 0.51
SIX6O95475 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SIX6O95475 RNF166-209ENST00000567844 633 ntTSL 5 BASIC18.22■□□□□ 0.51
SIX6O95475 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SIX6O95475 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SIX6O95475 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SIX6O95475 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SIX6O95475 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SIX6O95475 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SIX6O95475 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SIX6O95475 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SIX6O95475 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.21■□□□□ 0.51
SIX6O95475 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SIX6O95475 CR559946.2-201ENST00000623684 991 ntBASIC18.21■□□□□ 0.51
SIX6O95475 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
SIX6O95475 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SIX6O95475 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.2■□□□□ 0.5
SIX6O95475 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SIX6O95475 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SIX6O95475 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SIX6O95475 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
SIX6O95475 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.2■□□□□ 0.5
SIX6O95475 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SIX6O95475 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SIX6O95475 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC18.2■□□□□ 0.5
SIX6O95475 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC18.2■□□□□ 0.5
SIX6O95475 AC092296.2-201ENST00000589470 999 ntBASIC18.2■□□□□ 0.5
SIX6O95475 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SIX6O95475 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
SIX6O95475 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SIX6O95475 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
SIX6O95475 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SIX6O95475 Z98882.1-201ENST00000622160 2253 ntBASIC18.2■□□□□ 0.5
SIX6O95475 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SIX6O95475 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.2■□□□□ 0.5
SIX6O95475 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SIX6O95475 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SIX6O95475 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SIX6O95475 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
SIX6O95475 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.19■□□□□ 0.5
SIX6O95475 FEM1AP4-201ENST00000443167 1987 ntBASIC18.19■□□□□ 0.5
SIX6O95475 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.19■□□□□ 0.5
SIX6O95475 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.19■□□□□ 0.5
SIX6O95475 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.19■□□□□ 0.5
SIX6O95475 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC18.19■□□□□ 0.5
SIX6O95475 AGPS-202ENST00000409888 815 ntTSL 4 BASIC18.19■□□□□ 0.5
SIX6O95475 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SIX6O95475 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC18.19■□□□□ 0.5
SIX6O95475 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.19■□□□□ 0.5
SIX6O95475 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SIX6O95475 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC18.19■□□□□ 0.5
SIX6O95475 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.5
SIX6O95475 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SIX6O95475 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SIX6O95475 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
SIX6O95475 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
SIX6O95475 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SIX6O95475 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SIX6O95475 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
SIX6O95475 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
SIX6O95475 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SIX6O95475 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SIX6O95475 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SIX6O95475 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SIX6O95475 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.18■□□□□ 0.5
SIX6O95475 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SIX6O95475 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SIX6O95475 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SIX6O95475 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.18■□□□□ 0.5
SIX6O95475 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SIX6O95475 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SIX6O95475 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
SIX6O95475 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms