Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SNX4O95219 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.38■□□□□ 0.85
SNX4O95219 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
SNX4O95219 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
SNX4O95219 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SNX4O95219 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SNX4O95219 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SNX4O95219 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SNX4O95219 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SNX4O95219 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
SNX4O95219 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
SNX4O95219 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.37■□□□□ 0.85
SNX4O95219 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.37■□□□□ 0.85
SNX4O95219 MIR4767-201ENST00000582827 78 ntBASIC20.37■□□□□ 0.85
SNX4O95219 AL499627.2-201ENST00000606283 725 ntBASIC20.37■□□□□ 0.85
SNX4O95219 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.37■□□□□ 0.85
SNX4O95219 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SNX4O95219 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SNX4O95219 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
SNX4O95219 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SNX4O95219 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SNX4O95219 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SNX4O95219 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SNX4O95219 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.36■□□□□ 0.85
SNX4O95219 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
SNX4O95219 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
SNX4O95219 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SNX4O95219 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.36■□□□□ 0.85
SNX4O95219 GUSBP5-202ENST00000510805 1989 ntBASIC20.36■□□□□ 0.85
SNX4O95219 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SNX4O95219 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SNX4O95219 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.36■□□□□ 0.85
SNX4O95219 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.36■□□□□ 0.85
SNX4O95219 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.36■□□□□ 0.85
SNX4O95219 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.36■□□□□ 0.85
SNX4O95219 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SNX4O95219 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.36■□□□□ 0.85
SNX4O95219 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SNX4O95219 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.36■□□□□ 0.85
SNX4O95219 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.35■□□□□ 0.85
SNX4O95219 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SNX4O95219 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SNX4O95219 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
SNX4O95219 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SNX4O95219 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
SNX4O95219 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
SNX4O95219 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SNX4O95219 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SNX4O95219 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SNX4O95219 AC142381.2-201ENST00000566120 298 ntBASIC20.35■□□□□ 0.85
SNX4O95219 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
SNX4O95219 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SNX4O95219 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.35■□□□□ 0.85
SNX4O95219 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SNX4O95219 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SNX4O95219 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
SNX4O95219 AC079630.1-202ENST00000618127 1840 ntBASIC20.34■□□□□ 0.85
SNX4O95219 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SNX4O95219 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.34■□□□□ 0.85
SNX4O95219 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SNX4O95219 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SNX4O95219 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SNX4O95219 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.34■□□□□ 0.85
SNX4O95219 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
SNX4O95219 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.34■□□□□ 0.85
SNX4O95219 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.34■□□□□ 0.85
SNX4O95219 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.34■□□□□ 0.85
SNX4O95219 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.34■□□□□ 0.85
SNX4O95219 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SNX4O95219 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SNX4O95219 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
SNX4O95219 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SNX4O95219 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SNX4O95219 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SNX4O95219 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SNX4O95219 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SNX4O95219 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SNX4O95219 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SNX4O95219 SUDS3P1-201ENST00000505831 966 ntBASIC20.33■□□□□ 0.85
SNX4O95219 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.33■□□□□ 0.85
SNX4O95219 AL031432.3-201ENST00000607698 485 ntBASIC20.33■□□□□ 0.85
SNX4O95219 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.33■□□□□ 0.85
SNX4O95219 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
SNX4O95219 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.33■□□□□ 0.84
SNX4O95219 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SNX4O95219 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SNX4O95219 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.33■□□□□ 0.84
SNX4O95219 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.33■□□□□ 0.84
SNX4O95219 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.32■□□□□ 0.84
SNX4O95219 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.32■□□□□ 0.84
SNX4O95219 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNX4O95219 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNX4O95219 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
SNX4O95219 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNX4O95219 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
SNX4O95219 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.32■□□□□ 0.84
SNX4O95219 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.32■□□□□ 0.84
SNX4O95219 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNX4O95219 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNX4O95219 AC133637.1-201ENST00000624115 1537 ntBASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms