Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC23■■□□□ 1.27
RTN3O95197 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC23■■□□□ 1.27
RTN3O95197 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RTN3O95197 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RTN3O95197 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC23■■□□□ 1.27
RTN3O95197 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RTN3O95197 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
RTN3O95197 YBX1P1-201ENST00000445822 960 ntBASIC23■■□□□ 1.27
RTN3O95197 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC23■■□□□ 1.27
RTN3O95197 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC23■■□□□ 1.27
RTN3O95197 PLD4-205ENST00000553861 667 ntTSL 2 BASIC23■■□□□ 1.27
RTN3O95197 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
RTN3O95197 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
RTN3O95197 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC23■■□□□ 1.27
RTN3O95197 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RTN3O95197 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
RTN3O95197 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC22.99■■□□□ 1.27
RTN3O95197 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC22.99■■□□□ 1.27
RTN3O95197 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
RTN3O95197 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC22.99■■□□□ 1.27
RTN3O95197 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC22.99■■□□□ 1.27
RTN3O95197 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC22.99■■□□□ 1.27
RTN3O95197 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RTN3O95197 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC22.99■■□□□ 1.27
RTN3O95197 USP45-205ENST00000472914 1617 ntTSL 5 BASIC22.99■■□□□ 1.27
RTN3O95197 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RTN3O95197 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
RTN3O95197 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
RTN3O95197 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RTN3O95197 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC22.98■■□□□ 1.27
RTN3O95197 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
RTN3O95197 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC22.98■■□□□ 1.27
RTN3O95197 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC22.98■■□□□ 1.27
RTN3O95197 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RTN3O95197 AC087623.3-201ENST00000607047 1098 ntBASIC22.98■■□□□ 1.27
RTN3O95197 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
RTN3O95197 MPST-204ENST00000404393 1329 ntTSL 5 BASIC22.98■■□□□ 1.27
RTN3O95197 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RTN3O95197 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RTN3O95197 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
RTN3O95197 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC22.97■■□□□ 1.27
RTN3O95197 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC22.97■■□□□ 1.27
RTN3O95197 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC22.97■■□□□ 1.27
RTN3O95197 AC123595.1-201ENST00000440769 1046 ntBASIC22.97■■□□□ 1.27
RTN3O95197 MIR6084-201ENST00000622012 110 ntBASIC22.97■■□□□ 1.27
RTN3O95197 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
RTN3O95197 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC22.97■■□□□ 1.27
RTN3O95197 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RTN3O95197 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RTN3O95197 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RTN3O95197 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC22.96■■□□□ 1.27
RTN3O95197 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RTN3O95197 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC22.96■■□□□ 1.27
RTN3O95197 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
RTN3O95197 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RTN3O95197 MFF-208ENST00000409616 1247 ntTSL 5 BASIC22.96■■□□□ 1.27
RTN3O95197 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC22.96■■□□□ 1.27
RTN3O95197 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC22.96■■□□□ 1.27
RTN3O95197 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
RTN3O95197 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
RTN3O95197 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RTN3O95197 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC22.96■■□□□ 1.27
RTN3O95197 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.27
RTN3O95197 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.27
RTN3O95197 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
RTN3O95197 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
RTN3O95197 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC22.95■■□□□ 1.26
RTN3O95197 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC22.95■■□□□ 1.26
RTN3O95197 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC22.95■■□□□ 1.26
RTN3O95197 OXCT2P1-201ENST00000447263 1535 ntBASIC22.95■■□□□ 1.26
RTN3O95197 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC22.95■■□□□ 1.26
RTN3O95197 AC068473.5-201ENST00000616428 2072 ntBASIC22.95■■□□□ 1.26
RTN3O95197 AL024507.2-201ENST00000606070 2574 ntBASIC22.95■■□□□ 1.26
RTN3O95197 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
RTN3O95197 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
RTN3O95197 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
RTN3O95197 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC22.94■■□□□ 1.26
RTN3O95197 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
RTN3O95197 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
RTN3O95197 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
RTN3O95197 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
RTN3O95197 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
RTN3O95197 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC22.94■■□□□ 1.26
RTN3O95197 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
RTN3O95197 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC22.94■■□□□ 1.26
RTN3O95197 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
RTN3O95197 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC22.93■■□□□ 1.26
RTN3O95197 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC22.93■■□□□ 1.26
RTN3O95197 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
RTN3O95197 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC22.93■■□□□ 1.26
RTN3O95197 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
RTN3O95197 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC22.93■■□□□ 1.26
RTN3O95197 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC22.92■■□□□ 1.26
RTN3O95197 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC22.92■■□□□ 1.26
RTN3O95197 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
RTN3O95197 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC22.92■■□□□ 1.26
RTN3O95197 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
RTN3O95197 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
RTN3O95197 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC22.92■■□□□ 1.26
RTN3O95197 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms