Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SCAF4O95104 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SCAF4O95104 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SCAF4O95104 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
SCAF4O95104 AC139530.1-201ENST00000575312 1977 ntBASIC17.77■□□□□ 0.44
SCAF4O95104 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
SCAF4O95104 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SCAF4O95104 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SCAF4O95104 MIR4508-201ENST00000584178 70 ntBASIC17.77■□□□□ 0.44
SCAF4O95104 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SCAF4O95104 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC17.77■□□□□ 0.44
SCAF4O95104 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SCAF4O95104 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SCAF4O95104 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC17.77■□□□□ 0.43
SCAF4O95104 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SCAF4O95104 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
SCAF4O95104 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
SCAF4O95104 FBXW4P1-201ENST00000426721 2239 ntBASIC17.76■□□□□ 0.43
SCAF4O95104 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SCAF4O95104 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SCAF4O95104 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SCAF4O95104 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SCAF4O95104 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SCAF4O95104 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC17.76■□□□□ 0.43
SCAF4O95104 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SCAF4O95104 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC17.76■□□□□ 0.43
SCAF4O95104 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SCAF4O95104 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
SCAF4O95104 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SCAF4O95104 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SCAF4O95104 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SCAF4O95104 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC17.75■□□□□ 0.43
SCAF4O95104 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SCAF4O95104 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SCAF4O95104 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SCAF4O95104 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SCAF4O95104 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC17.75■□□□□ 0.43
SCAF4O95104 AC022616.5-201ENST00000518796 181 ntBASIC17.75■□□□□ 0.43
SCAF4O95104 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SCAF4O95104 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SCAF4O95104 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SCAF4O95104 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
SCAF4O95104 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC17.74■□□□□ 0.43
SCAF4O95104 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SCAF4O95104 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCAF4O95104 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC17.74■□□□□ 0.43
SCAF4O95104 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SCAF4O95104 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
SCAF4O95104 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCAF4O95104 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCAF4O95104 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SCAF4O95104 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SCAF4O95104 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SCAF4O95104 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
SCAF4O95104 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCAF4O95104 PALM-208ENST00000592155 2272 ntTSL 4 BASIC17.73■□□□□ 0.43
SCAF4O95104 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCAF4O95104 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
SCAF4O95104 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
SCAF4O95104 AC103724.3-201ENST00000564481 992 ntBASIC17.73■□□□□ 0.43
SCAF4O95104 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC17.73■□□□□ 0.43
SCAF4O95104 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCAF4O95104 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC17.73■□□□□ 0.43
SCAF4O95104 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCAF4O95104 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCAF4O95104 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
SCAF4O95104 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SCAF4O95104 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC17.72■□□□□ 0.43
SCAF4O95104 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCAF4O95104 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCAF4O95104 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCAF4O95104 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SCAF4O95104 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCAF4O95104 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC17.72■□□□□ 0.43
SCAF4O95104 AL031848.2-201ENST00000607670 837 ntBASIC17.72■□□□□ 0.43
SCAF4O95104 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCAF4O95104 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCAF4O95104 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
SCAF4O95104 AC092667.1-201ENST00000434301 2586 ntBASIC17.72■□□□□ 0.43
SCAF4O95104 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SCAF4O95104 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCAF4O95104 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC17.72■□□□□ 0.43
SCAF4O95104 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCAF4O95104 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCAF4O95104 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCAF4O95104 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC17.71■□□□□ 0.43
SCAF4O95104 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.71■□□□□ 0.43
SCAF4O95104 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCAF4O95104 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SCAF4O95104 LBH-205ENST00000407930 756 ntTSL 2 BASIC17.71■□□□□ 0.43
SCAF4O95104 THA1P-201ENST00000590384 1145 ntBASIC17.71■□□□□ 0.43
SCAF4O95104 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC17.71■□□□□ 0.43
SCAF4O95104 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC17.71■□□□□ 0.43
SCAF4O95104 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCAF4O95104 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCAF4O95104 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SCAF4O95104 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
SCAF4O95104 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
SCAF4O95104 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
SCAF4O95104 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms