Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC29.36■■■□□ 2.29
LTN1O94822 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
LTN1O94822 AC079140.4-201ENST00000507448 529 ntBASIC29.36■■■□□ 2.29
LTN1O94822 UBE2DNL-204ENST00000602536 740 ntBASIC29.36■■■□□ 2.29
LTN1O94822 AC104187.1-201ENST00000607510 612 ntBASIC29.36■■■□□ 2.29
LTN1O94822 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC29.36■■■□□ 2.29
LTN1O94822 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
LTN1O94822 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC29.35■■■□□ 2.29
LTN1O94822 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
LTN1O94822 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC29.35■■■□□ 2.29
LTN1O94822 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC29.34■■■□□ 2.29
LTN1O94822 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC29.34■■■□□ 2.29
LTN1O94822 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC29.34■■■□□ 2.29
LTN1O94822 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC29.34■■■□□ 2.29
LTN1O94822 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
LTN1O94822 DUSP8P3-201ENST00000399571 1760 ntBASIC29.34■■■□□ 2.29
LTN1O94822 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
LTN1O94822 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
LTN1O94822 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC29.34■■■□□ 2.29
LTN1O94822 AC006970.2-201ENST00000450065 779 ntBASIC29.34■■■□□ 2.29
LTN1O94822 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
LTN1O94822 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
LTN1O94822 SPI1-203ENST00000533030 661 ntTSL 2 BASIC29.33■■■□□ 2.29
LTN1O94822 WT1-AS_3.1-201ENST00000613262 234 ntBASIC29.33■■■□□ 2.29
LTN1O94822 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC29.33■■■□□ 2.29
LTN1O94822 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
LTN1O94822 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
LTN1O94822 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
LTN1O94822 KRT18P11-201ENST00000435214 1283 ntBASIC29.32■■■□□ 2.28
LTN1O94822 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC29.32■■■□□ 2.28
LTN1O94822 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC29.32■■■□□ 2.28
LTN1O94822 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
LTN1O94822 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC29.32■■■□□ 2.28
LTN1O94822 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
LTN1O94822 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC29.32■■■□□ 2.28
LTN1O94822 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC29.31■■■□□ 2.28
LTN1O94822 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC29.31■■■□□ 2.28
LTN1O94822 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
LTN1O94822 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC29.31■■■□□ 2.28
LTN1O94822 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC29.31■■■□□ 2.28
LTN1O94822 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC29.31■■■□□ 2.28
LTN1O94822 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC29.31■■■□□ 2.28
LTN1O94822 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC29.31■■■□□ 2.28
LTN1O94822 ASL-203ENST00000380839 1765 ntTSL 5 BASIC29.31■■■□□ 2.28
LTN1O94822 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
LTN1O94822 MAP2K4P1-201ENST00000438453 1195 ntBASIC29.31■■■□□ 2.28
LTN1O94822 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC29.31■■■□□ 2.28
LTN1O94822 TESC-206ENST00000541210 936 ntTSL 3 BASIC29.31■■■□□ 2.28
LTN1O94822 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC29.31■■■□□ 2.28
LTN1O94822 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
LTN1O94822 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC29.3■■■□□ 2.28
LTN1O94822 NCF1B-203ENST00000435988 1254 ntBASIC29.3■■■□□ 2.28
LTN1O94822 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC29.3■■■□□ 2.28
LTN1O94822 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC29.3■■■□□ 2.28
LTN1O94822 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC29.3■■■□□ 2.28
LTN1O94822 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
LTN1O94822 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC29.3■■■□□ 2.28
LTN1O94822 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC29.29■■■□□ 2.28
LTN1O94822 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
LTN1O94822 ABHD17AP1-201ENST00000358206 933 ntBASIC29.29■■■□□ 2.28
LTN1O94822 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
LTN1O94822 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC29.29■■■□□ 2.28
LTN1O94822 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC29.29■■■□□ 2.28
LTN1O94822 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC29.29■■■□□ 2.28
LTN1O94822 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC29.29■■■□□ 2.28
LTN1O94822 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC29.29■■■□□ 2.28
LTN1O94822 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC29.29■■■□□ 2.28
LTN1O94822 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
LTN1O94822 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC29.29■■■□□ 2.28
LTN1O94822 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC29.29■■■□□ 2.28
LTN1O94822 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC29.29■■■□□ 2.28
LTN1O94822 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC29.29■■■□□ 2.28
LTN1O94822 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC29.28■■■□□ 2.28
LTN1O94822 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC29.28■■■□□ 2.28
LTN1O94822 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC29.28■■■□□ 2.28
LTN1O94822 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
LTN1O94822 AL109923.1-201ENST00000618799 583 ntBASIC29.28■■■□□ 2.28
LTN1O94822 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
LTN1O94822 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC29.27■■■□□ 2.28
LTN1O94822 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC29.27■■■□□ 2.28
LTN1O94822 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC29.27■■■□□ 2.28
LTN1O94822 GAMT-205ENST00000640762 751 ntTSL 5 BASIC29.27■■■□□ 2.28
LTN1O94822 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC29.27■■■□□ 2.28
LTN1O94822 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC29.27■■■□□ 2.28
LTN1O94822 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
LTN1O94822 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC29.27■■■□□ 2.28
LTN1O94822 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC29.27■■■□□ 2.28
LTN1O94822 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.28
LTN1O94822 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.28
LTN1O94822 GUSBP6-202ENST00000438529 1198 ntBASIC29.26■■■□□ 2.28
LTN1O94822 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC29.26■■■□□ 2.28
LTN1O94822 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC29.26■■■□□ 2.28
LTN1O94822 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC29.26■■■□□ 2.28
LTN1O94822 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
LTN1O94822 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
LTN1O94822 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
LTN1O94822 SLC7A5P2-201ENST00000553010 536 ntBASIC29.26■■■□□ 2.27
LTN1O94822 AC092068.2-201ENST00000590491 1708 ntBASIC29.25■■■□□ 2.27
LTN1O94822 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC29.25■■■□□ 2.27
LTN1O94822 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC29.25■■■□□ 2.27
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms