Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
USH2AO75445 RPS20-210ENST00000523936 899 ntTSL 2 BASIC9.91□□□□□ -0.82
USH2AO75445 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC9.91□□□□□ -0.82
USH2AO75445 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
USH2AO75445 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
USH2AO75445 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
USH2AO75445 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC9.91□□□□□ -0.82
USH2AO75445 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC9.91□□□□□ -0.82
USH2AO75445 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
USH2AO75445 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
USH2AO75445 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC9.91□□□□□ -0.82
USH2AO75445 TSPY15P-201ENST00000457163 923 ntBASIC9.91□□□□□ -0.82
USH2AO75445 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC9.91□□□□□ -0.82
USH2AO75445 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC9.91□□□□□ -0.82
USH2AO75445 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC9.91□□□□□ -0.82
USH2AO75445 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC9.91□□□□□ -0.82
USH2AO75445 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
USH2AO75445 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC9.91□□□□□ -0.82
USH2AO75445 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
USH2AO75445 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC9.9□□□□□ -0.82
USH2AO75445 UBE2SP1-201ENST00000450587 669 ntBASIC9.9□□□□□ -0.82
USH2AO75445 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
USH2AO75445 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
USH2AO75445 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
USH2AO75445 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC9.9□□□□□ -0.82
USH2AO75445 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
USH2AO75445 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
USH2AO75445 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
USH2AO75445 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
USH2AO75445 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC9.9□□□□□ -0.82
USH2AO75445 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC9.9□□□□□ -0.82
USH2AO75445 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC9.9□□□□□ -0.82
USH2AO75445 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
USH2AO75445 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
USH2AO75445 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.82
USH2AO75445 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
USH2AO75445 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC9.9□□□□□ -0.82
USH2AO75445 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
USH2AO75445 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
USH2AO75445 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC9.9□□□□□ -0.83
USH2AO75445 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
USH2AO75445 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC9.9□□□□□ -0.83
USH2AO75445 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC9.9□□□□□ -0.83
USH2AO75445 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC9.9□□□□□ -0.83
USH2AO75445 CD37-213ENST00000598095 1598 ntTSL 2 BASIC9.9□□□□□ -0.83
USH2AO75445 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
USH2AO75445 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC9.89□□□□□ -0.83
USH2AO75445 RNF121-214ENST00000533380 870 ntTSL 3 BASIC9.89□□□□□ -0.83
USH2AO75445 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC9.89□□□□□ -0.83
USH2AO75445 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC9.89□□□□□ -0.83
USH2AO75445 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC9.89□□□□□ -0.83
USH2AO75445 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
USH2AO75445 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
USH2AO75445 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
USH2AO75445 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
USH2AO75445 MIR4758-201ENST00000577688 71 ntBASIC9.89□□□□□ -0.83
USH2AO75445 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
USH2AO75445 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
USH2AO75445 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
USH2AO75445 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC9.89□□□□□ -0.83
USH2AO75445 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
USH2AO75445 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC9.89□□□□□ -0.83
USH2AO75445 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC9.89□□□□□ -0.83
USH2AO75445 SLC6A10P-202ENST00000431994 2058 ntBASIC9.89□□□□□ -0.83
USH2AO75445 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
USH2AO75445 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
USH2AO75445 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
USH2AO75445 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
USH2AO75445 INO80E-214ENST00000620599 515 ntTSL 2 BASIC9.89□□□□□ -0.83
USH2AO75445 ASL-203ENST00000380839 1765 ntTSL 5 BASIC9.89□□□□□ -0.83
USH2AO75445 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
USH2AO75445 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
USH2AO75445 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC9.89□□□□□ -0.83
USH2AO75445 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC9.89□□□□□ -0.83
USH2AO75445 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC9.89□□□□□ -0.83
USH2AO75445 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC9.89□□□□□ -0.83
USH2AO75445 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC9.89□□□□□ -0.83
USH2AO75445 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC9.89□□□□□ -0.83
USH2AO75445 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
USH2AO75445 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
USH2AO75445 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
USH2AO75445 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
USH2AO75445 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
USH2AO75445 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
USH2AO75445 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
USH2AO75445 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
USH2AO75445 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
USH2AO75445 PLLP-204ENST00000569059 665 ntTSL 3 BASIC9.88□□□□□ -0.83
USH2AO75445 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC9.88□□□□□ -0.83
USH2AO75445 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
USH2AO75445 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
USH2AO75445 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
USH2AO75445 MDFI-202ENST00000373050 809 ntTSL 2 BASIC9.88□□□□□ -0.83
USH2AO75445 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC9.88□□□□□ -0.83
USH2AO75445 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC9.88□□□□□ -0.83
USH2AO75445 NT5C-211ENST00000582170 653 ntTSL 3 BASIC9.88□□□□□ -0.83
USH2AO75445 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
USH2AO75445 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
USH2AO75445 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
USH2AO75445 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms