Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TRIM3O75382 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
TRIM3O75382 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.27■□□□□ 0.83
TRIM3O75382 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM3O75382 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM3O75382 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.26■□□□□ 0.83
TRIM3O75382 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
TRIM3O75382 RASA4CP-201ENST00000424092 1398 ntBASIC20.26■□□□□ 0.83
TRIM3O75382 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
TRIM3O75382 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.26■□□□□ 0.83
TRIM3O75382 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.26■□□□□ 0.83
TRIM3O75382 BX842568.3-201ENST00000418104 571 ntBASIC20.26■□□□□ 0.83
TRIM3O75382 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM3O75382 AC008764.7-201ENST00000593779 1081 ntBASIC20.26■□□□□ 0.83
TRIM3O75382 AC233992.3-201ENST00000607491 485 ntBASIC20.26■□□□□ 0.83
TRIM3O75382 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.26■□□□□ 0.83
TRIM3O75382 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM3O75382 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.26■□□□□ 0.83
TRIM3O75382 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM3O75382 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM3O75382 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM3O75382 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
TRIM3O75382 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM3O75382 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
TRIM3O75382 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM3O75382 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM3O75382 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM3O75382 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM3O75382 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM3O75382 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.25■□□□□ 0.83
TRIM3O75382 AL353803.4-201ENST00000565882 1934 ntBASIC20.25■□□□□ 0.83
TRIM3O75382 AC137767.1-201ENST00000602918 1920 ntBASIC20.25■□□□□ 0.83
TRIM3O75382 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM3O75382 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
TRIM3O75382 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
TRIM3O75382 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM3O75382 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.24■□□□□ 0.83
TRIM3O75382 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM3O75382 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.24■□□□□ 0.83
TRIM3O75382 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
TRIM3O75382 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM3O75382 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM3O75382 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM3O75382 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.24■□□□□ 0.83
TRIM3O75382 AC099791.1-201ENST00000416440 715 ntBASIC20.24■□□□□ 0.83
TRIM3O75382 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.24■□□□□ 0.83
TRIM3O75382 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.24■□□□□ 0.83
TRIM3O75382 CA15P2-201ENST00000611168 834 ntBASIC20.24■□□□□ 0.83
TRIM3O75382 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM3O75382 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM3O75382 C9orf163-202ENST00000624034 2573 ntBASIC20.24■□□□□ 0.83
TRIM3O75382 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM3O75382 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM3O75382 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
TRIM3O75382 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM3O75382 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
TRIM3O75382 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM3O75382 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM3O75382 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM3O75382 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM3O75382 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
TRIM3O75382 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
TRIM3O75382 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.23■□□□□ 0.83
TRIM3O75382 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
TRIM3O75382 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
TRIM3O75382 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM3O75382 DUSP8P3-201ENST00000399571 1760 ntBASIC20.22■□□□□ 0.83
TRIM3O75382 SLC47A1P1-202ENST00000449666 945 ntBASIC20.22■□□□□ 0.83
TRIM3O75382 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM3O75382 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
TRIM3O75382 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.22■□□□□ 0.83
TRIM3O75382 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM3O75382 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
TRIM3O75382 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM3O75382 EP400NL-214ENST00000641289 2402 ntBASIC20.21■□□□□ 0.83
TRIM3O75382 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM3O75382 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM3O75382 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM3O75382 ZNRF2P3-201ENST00000424200 374 ntBASIC20.21■□□□□ 0.83
TRIM3O75382 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.21■□□□□ 0.83
TRIM3O75382 OR2I1P-207ENST00000453522 948 ntBASIC20.21■□□□□ 0.83
TRIM3O75382 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.21■□□□□ 0.83
TRIM3O75382 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
TRIM3O75382 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.21■□□□□ 0.83
TRIM3O75382 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM3O75382 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM3O75382 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM3O75382 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM3O75382 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.21■□□□□ 0.83
TRIM3O75382 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM3O75382 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM3O75382 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.21■□□□□ 0.83
TRIM3O75382 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.21■□□□□ 0.83
TRIM3O75382 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM3O75382 C1orf229-201ENST00000623686 2258 ntBASIC20.2■□□□□ 0.82
TRIM3O75382 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM3O75382 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.2■□□□□ 0.82
TRIM3O75382 AC233723.2-201ENST00000623798 2106 ntBASIC20.2■□□□□ 0.82
TRIM3O75382 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.2■□□□□ 0.82
TRIM3O75382 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms