Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TSPAN3O60637 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC22.52■■□□□ 1.2
TSPAN3O60637 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TSPAN3O60637 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TSPAN3O60637 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC22.52■■□□□ 1.2
TSPAN3O60637 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TSPAN3O60637 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TSPAN3O60637 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TSPAN3O60637 NT5C3AP1-201ENST00000394500 1012 ntBASIC22.52■■□□□ 1.2
TSPAN3O60637 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TSPAN3O60637 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC22.52■■□□□ 1.2
TSPAN3O60637 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
TSPAN3O60637 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TSPAN3O60637 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
TSPAN3O60637 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC22.52■■□□□ 1.19
TSPAN3O60637 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC22.52■■□□□ 1.19
TSPAN3O60637 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TSPAN3O60637 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC22.51■■□□□ 1.19
TSPAN3O60637 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
TSPAN3O60637 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
TSPAN3O60637 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TSPAN3O60637 AC027612.3-201ENST00000413684 1047 ntBASIC22.51■■□□□ 1.19
TSPAN3O60637 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
TSPAN3O60637 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC22.51■■□□□ 1.19
TSPAN3O60637 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC22.51■■□□□ 1.19
TSPAN3O60637 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TSPAN3O60637 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
TSPAN3O60637 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC22.5■■□□□ 1.19
TSPAN3O60637 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TSPAN3O60637 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC22.5■■□□□ 1.19
TSPAN3O60637 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TSPAN3O60637 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC22.5■■□□□ 1.19
TSPAN3O60637 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TSPAN3O60637 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC22.5■■□□□ 1.19
TSPAN3O60637 RAB43-208ENST00000615093 783 ntTSL 5 BASIC22.5■■□□□ 1.19
TSPAN3O60637 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TSPAN3O60637 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TSPAN3O60637 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TSPAN3O60637 MPST-204ENST00000404393 1329 ntTSL 5 BASIC22.5■■□□□ 1.19
TSPAN3O60637 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TSPAN3O60637 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC22.5■■□□□ 1.19
TSPAN3O60637 LINC01960-201ENST00000563759 1884 ntBASIC22.49■■□□□ 1.19
TSPAN3O60637 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
TSPAN3O60637 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TSPAN3O60637 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TSPAN3O60637 HACD1-201ENST00000326961 773 ntTSL 2 BASIC22.49■■□□□ 1.19
TSPAN3O60637 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
TSPAN3O60637 AL162430.1-201ENST00000480705 870 ntBASIC22.49■■□□□ 1.19
TSPAN3O60637 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
TSPAN3O60637 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC22.49■■□□□ 1.19
TSPAN3O60637 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
TSPAN3O60637 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TSPAN3O60637 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
TSPAN3O60637 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
TSPAN3O60637 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
TSPAN3O60637 OXCT2P1-201ENST00000447263 1535 ntBASIC22.48■■□□□ 1.19
TSPAN3O60637 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TSPAN3O60637 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
TSPAN3O60637 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC22.48■■□□□ 1.19
TSPAN3O60637 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
TSPAN3O60637 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TSPAN3O60637 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC22.48■■□□□ 1.19
TSPAN3O60637 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC22.48■■□□□ 1.19
TSPAN3O60637 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TSPAN3O60637 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC22.47■■□□□ 1.19
TSPAN3O60637 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
TSPAN3O60637 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TSPAN3O60637 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TSPAN3O60637 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
TSPAN3O60637 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
TSPAN3O60637 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TSPAN3O60637 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC22.46■■□□□ 1.19
TSPAN3O60637 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
TSPAN3O60637 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
TSPAN3O60637 AC123595.1-201ENST00000440769 1046 ntBASIC22.46■■□□□ 1.19
TSPAN3O60637 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC22.46■■□□□ 1.19
TSPAN3O60637 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
TSPAN3O60637 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC22.46■■□□□ 1.19
TSPAN3O60637 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TSPAN3O60637 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC22.46■■□□□ 1.19
TSPAN3O60637 DUSP8P5-201ENST00000422884 1815 ntBASIC22.45■■□□□ 1.19
TSPAN3O60637 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC22.45■■□□□ 1.18
TSPAN3O60637 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
TSPAN3O60637 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
TSPAN3O60637 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
TSPAN3O60637 MFF-208ENST00000409616 1247 ntTSL 5 BASIC22.45■■□□□ 1.18
TSPAN3O60637 PARL-206ENST00000435888 1098 ntTSL 5 BASIC22.45■■□□□ 1.18
TSPAN3O60637 AC034268.1-201ENST00000441047 882 ntBASIC22.45■■□□□ 1.18
TSPAN3O60637 CCDC92B-201ENST00000575506 885 ntBASIC22.45■■□□□ 1.18
TSPAN3O60637 SMUG1P1-201ENST00000590640 811 ntBASIC22.45■■□□□ 1.18
TSPAN3O60637 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
TSPAN3O60637 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
TSPAN3O60637 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC22.45■■□□□ 1.18
TSPAN3O60637 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
TSPAN3O60637 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
TSPAN3O60637 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
TSPAN3O60637 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
TSPAN3O60637 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
TSPAN3O60637 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
TSPAN3O60637 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC22.44■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms