Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
GFRA3O60609 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
GFRA3O60609 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
GFRA3O60609 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
GFRA3O60609 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
GFRA3O60609 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC21.58■■□□□ 1.05
GFRA3O60609 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC21.58■■□□□ 1.05
GFRA3O60609 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
GFRA3O60609 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
GFRA3O60609 FP325331.1-202ENST00000623531 1380 ntBASIC21.58■■□□□ 1.04
GFRA3O60609 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
GFRA3O60609 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
GFRA3O60609 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC21.57■■□□□ 1.04
GFRA3O60609 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC21.57■■□□□ 1.04
GFRA3O60609 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
GFRA3O60609 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
GFRA3O60609 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
GFRA3O60609 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
GFRA3O60609 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
GFRA3O60609 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
GFRA3O60609 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
GFRA3O60609 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
GFRA3O60609 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
GFRA3O60609 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC21.57■■□□□ 1.04
GFRA3O60609 BX276092.2-201ENST00000417668 665 ntBASIC21.57■■□□□ 1.04
GFRA3O60609 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC21.57■■□□□ 1.04
GFRA3O60609 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
GFRA3O60609 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC21.57■■□□□ 1.04
GFRA3O60609 TK2-213ENST00000563369 882 ntTSL 5 BASIC21.57■■□□□ 1.04
GFRA3O60609 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.57■■□□□ 1.04
GFRA3O60609 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.57■■□□□ 1.04
GFRA3O60609 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.57■■□□□ 1.04
GFRA3O60609 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
GFRA3O60609 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.57■■□□□ 1.04
GFRA3O60609 ALDH1A3-203ENST00000557963 1670 ntBASIC21.56■■□□□ 1.04
GFRA3O60609 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
GFRA3O60609 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
GFRA3O60609 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
GFRA3O60609 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
GFRA3O60609 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
GFRA3O60609 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
GFRA3O60609 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.56■■□□□ 1.04
GFRA3O60609 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.56■■□□□ 1.04
GFRA3O60609 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC21.56■■□□□ 1.04
GFRA3O60609 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC21.56■■□□□ 1.04
GFRA3O60609 FAM197Y4-202ENST00000622692 608 ntBASIC21.56■■□□□ 1.04
GFRA3O60609 AC013268.1-206ENST00000638368 961 ntBASIC21.56■■□□□ 1.04
GFRA3O60609 AC112229.1-201ENST00000639295 961 ntBASIC21.56■■□□□ 1.04
GFRA3O60609 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
GFRA3O60609 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
GFRA3O60609 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.56■■□□□ 1.04
GFRA3O60609 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
GFRA3O60609 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
GFRA3O60609 AL161729.1-201ENST00000604104 1402 ntBASIC21.55■■□□□ 1.04
GFRA3O60609 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
GFRA3O60609 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
GFRA3O60609 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
GFRA3O60609 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
GFRA3O60609 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
GFRA3O60609 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC21.55■■□□□ 1.04
GFRA3O60609 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC21.55■■□□□ 1.04
GFRA3O60609 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
GFRA3O60609 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.55■■□□□ 1.04
GFRA3O60609 AP003097.1-201ENST00000530657 1135 ntBASIC21.55■■□□□ 1.04
GFRA3O60609 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
GFRA3O60609 OR10C1-204ENST00000622521 1039 ntBASIC21.55■■□□□ 1.04
GFRA3O60609 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.55■■□□□ 1.04
GFRA3O60609 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
GFRA3O60609 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.55■■□□□ 1.04
GFRA3O60609 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
GFRA3O60609 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
GFRA3O60609 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
GFRA3O60609 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
GFRA3O60609 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.54■■□□□ 1.04
GFRA3O60609 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
GFRA3O60609 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC21.54■■□□□ 1.04
GFRA3O60609 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC21.54■■□□□ 1.04
GFRA3O60609 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
GFRA3O60609 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
GFRA3O60609 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
GFRA3O60609 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
GFRA3O60609 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
GFRA3O60609 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.53■■□□□ 1.04
GFRA3O60609 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC21.53■■□□□ 1.04
GFRA3O60609 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC21.53■■□□□ 1.04
GFRA3O60609 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
GFRA3O60609 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
GFRA3O60609 AC008694.1-202ENST00000636953 945 ntBASIC21.53■■□□□ 1.04
GFRA3O60609 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
GFRA3O60609 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
GFRA3O60609 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.53■■□□□ 1.04
GFRA3O60609 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
GFRA3O60609 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
GFRA3O60609 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
GFRA3O60609 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
GFRA3O60609 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
GFRA3O60609 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
GFRA3O60609 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
GFRA3O60609 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC21.52■■□□□ 1.04
GFRA3O60609 AC093787.1-201ENST00000450396 207 ntBASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms