Protein–RNA interactions for Protein: O60393

NOBOX, Homeobox protein NOBOX, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOBOXO60393 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.56■■□□□ 1.04
NOBOXO60393 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.56■■□□□ 1.04
NOBOXO60393 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NOBOXO60393 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
NOBOXO60393 AC034268.1-201ENST00000441047 882 ntBASIC21.56■■□□□ 1.04
NOBOXO60393 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.56■■□□□ 1.04
NOBOXO60393 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NOBOXO60393 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.56■■□□□ 1.04
NOBOXO60393 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NOBOXO60393 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
NOBOXO60393 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.56■■□□□ 1.04
NOBOXO60393 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.56■■□□□ 1.04
NOBOXO60393 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NOBOXO60393 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NOBOXO60393 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.55■■□□□ 1.04
NOBOXO60393 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NOBOXO60393 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
NOBOXO60393 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
NOBOXO60393 AL354811.1-201ENST00000610286 706 ntBASIC21.55■■□□□ 1.04
NOBOXO60393 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
NOBOXO60393 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NOBOXO60393 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
NOBOXO60393 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.55■■□□□ 1.04
NOBOXO60393 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NOBOXO60393 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NOBOXO60393 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
NOBOXO60393 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
NOBOXO60393 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
NOBOXO60393 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
NOBOXO60393 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NOBOXO60393 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
NOBOXO60393 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NOBOXO60393 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NOBOXO60393 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.54■■□□□ 1.04
NOBOXO60393 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NOBOXO60393 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.54■■□□□ 1.04
NOBOXO60393 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.54■■□□□ 1.04
NOBOXO60393 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.54■■□□□ 1.04
NOBOXO60393 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.54■■□□□ 1.04
NOBOXO60393 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.54■■□□□ 1.04
NOBOXO60393 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.54■■□□□ 1.04
NOBOXO60393 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
NOBOXO60393 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.54■■□□□ 1.04
NOBOXO60393 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.53■■□□□ 1.04
NOBOXO60393 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
NOBOXO60393 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NOBOXO60393 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NOBOXO60393 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
NOBOXO60393 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.53■■□□□ 1.04
NOBOXO60393 AC123595.1-201ENST00000440769 1046 ntBASIC21.53■■□□□ 1.04
NOBOXO60393 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.53■■□□□ 1.04
NOBOXO60393 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
NOBOXO60393 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
NOBOXO60393 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NOBOXO60393 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NOBOXO60393 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NOBOXO60393 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.53■■□□□ 1.04
NOBOXO60393 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NOBOXO60393 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NOBOXO60393 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.52■■□□□ 1.04
NOBOXO60393 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NOBOXO60393 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NOBOXO60393 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
NOBOXO60393 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
NOBOXO60393 DUX4L2-201ENST00000561772 1275 ntBASIC21.52■■□□□ 1.04
NOBOXO60393 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.52■■□□□ 1.04
NOBOXO60393 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
NOBOXO60393 DUX4L6-201ENST00000626483 1275 ntBASIC21.52■■□□□ 1.04
NOBOXO60393 DUX4L1-201ENST00000627662 1275 ntBASIC21.52■■□□□ 1.04
NOBOXO60393 DUX4L8-201ENST00000629013 1275 ntBASIC21.52■■□□□ 1.04
NOBOXO60393 DUX4L3-201ENST00000630187 1275 ntBASIC21.52■■□□□ 1.04
NOBOXO60393 DUX4L7-201ENST00000630678 1275 ntBASIC21.52■■□□□ 1.04
NOBOXO60393 DUX4L5-201ENST00000630834 1275 ntBASIC21.52■■□□□ 1.04
NOBOXO60393 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NOBOXO60393 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.52■■□□□ 1.04
NOBOXO60393 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
NOBOXO60393 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
NOBOXO60393 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NOBOXO60393 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
NOBOXO60393 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
NOBOXO60393 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
NOBOXO60393 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.51■■□□□ 1.03
NOBOXO60393 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NOBOXO60393 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
NOBOXO60393 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NOBOXO60393 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NOBOXO60393 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.51■■□□□ 1.03
NOBOXO60393 AL117328.2-201ENST00000624617 1940 ntBASIC21.51■■□□□ 1.03
NOBOXO60393 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
NOBOXO60393 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.5■■□□□ 1.03
NOBOXO60393 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.5■■□□□ 1.03
NOBOXO60393 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.5■■□□□ 1.03
NOBOXO60393 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NOBOXO60393 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
NOBOXO60393 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
NOBOXO60393 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.5■■□□□ 1.03
NOBOXO60393 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
NOBOXO60393 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
NOBOXO60393 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NOBOXO60393 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms