Protein–RNA interactions for Protein: O60343

TBC1D4, TBC1 domain family member 4, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4O60343 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TBC1D4O60343 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
TBC1D4O60343 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC23.22■■□□□ 1.31
TBC1D4O60343 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC23.22■■□□□ 1.31
TBC1D4O60343 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC23.22■■□□□ 1.31
TBC1D4O60343 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
TBC1D4O60343 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
TBC1D4O60343 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
TBC1D4O60343 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC23.21■■□□□ 1.31
TBC1D4O60343 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
TBC1D4O60343 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
TBC1D4O60343 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
TBC1D4O60343 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC23.21■■□□□ 1.31
TBC1D4O60343 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TBC1D4O60343 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
TBC1D4O60343 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
TBC1D4O60343 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC23.2■■□□□ 1.3
TBC1D4O60343 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC23.2■■□□□ 1.3
TBC1D4O60343 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TBC1D4O60343 ME3-201ENST00000323418 1068 ntTSL 5 BASIC23.2■■□□□ 1.3
TBC1D4O60343 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC23.2■■□□□ 1.3
TBC1D4O60343 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
TBC1D4O60343 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TBC1D4O60343 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TBC1D4O60343 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TBC1D4O60343 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
TBC1D4O60343 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
TBC1D4O60343 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC23.19■■□□□ 1.3
TBC1D4O60343 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TBC1D4O60343 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TBC1D4O60343 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
TBC1D4O60343 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC23.19■■□□□ 1.3
TBC1D4O60343 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC23.19■■□□□ 1.3
TBC1D4O60343 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC23.19■■□□□ 1.3
TBC1D4O60343 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TBC1D4O60343 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.19■■□□□ 1.3
TBC1D4O60343 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TBC1D4O60343 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC23.19■■□□□ 1.3
TBC1D4O60343 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TBC1D4O60343 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC23.18■■□□□ 1.3
TBC1D4O60343 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TBC1D4O60343 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC23.18■■□□□ 1.3
TBC1D4O60343 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC23.18■■□□□ 1.3
TBC1D4O60343 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC23.18■■□□□ 1.3
TBC1D4O60343 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TBC1D4O60343 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TBC1D4O60343 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC23.17■■□□□ 1.3
TBC1D4O60343 GXYLT1P2-201ENST00000433312 1230 ntBASIC23.17■■□□□ 1.3
TBC1D4O60343 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC23.17■■□□□ 1.3
TBC1D4O60343 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TBC1D4O60343 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC23.17■■□□□ 1.3
TBC1D4O60343 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC23.17■■□□□ 1.3
TBC1D4O60343 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC23.16■■□□□ 1.3
TBC1D4O60343 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TBC1D4O60343 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC23.16■■□□□ 1.3
TBC1D4O60343 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC23.16■■□□□ 1.3
TBC1D4O60343 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
TBC1D4O60343 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC23.16■■□□□ 1.3
TBC1D4O60343 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC23.16■■□□□ 1.3
TBC1D4O60343 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC23.16■■□□□ 1.3
TBC1D4O60343 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TBC1D4O60343 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
TBC1D4O60343 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC23.15■■□□□ 1.3
TBC1D4O60343 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
TBC1D4O60343 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC23.15■■□□□ 1.3
TBC1D4O60343 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
TBC1D4O60343 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.3
TBC1D4O60343 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC23.14■■□□□ 1.3
TBC1D4O60343 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
TBC1D4O60343 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC23.14■■□□□ 1.3
TBC1D4O60343 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC23.14■■□□□ 1.3
TBC1D4O60343 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
TBC1D4O60343 AP004607.4-201ENST00000530158 1459 ntBASIC23.14■■□□□ 1.29
TBC1D4O60343 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
TBC1D4O60343 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
TBC1D4O60343 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC23.14■■□□□ 1.29
TBC1D4O60343 AC004911.1-201ENST00000416316 871 ntBASIC23.14■■□□□ 1.29
TBC1D4O60343 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
TBC1D4O60343 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
TBC1D4O60343 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC23.14■■□□□ 1.29
TBC1D4O60343 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
TBC1D4O60343 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
TBC1D4O60343 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC23.13■■□□□ 1.29
TBC1D4O60343 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC23.13■■□□□ 1.29
TBC1D4O60343 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
TBC1D4O60343 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TBC1D4O60343 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC23.13■■□□□ 1.29
TBC1D4O60343 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC23.13■■□□□ 1.29
TBC1D4O60343 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC23.13■■□□□ 1.29
TBC1D4O60343 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC23.13■■□□□ 1.29
TBC1D4O60343 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC23.13■■□□□ 1.29
TBC1D4O60343 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC23.13■■□□□ 1.29
TBC1D4O60343 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC23.13■■□□□ 1.29
TBC1D4O60343 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC23.13■■□□□ 1.29
TBC1D4O60343 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TBC1D4O60343 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
TBC1D4O60343 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
TBC1D4O60343 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
TBC1D4O60343 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TBC1D4O60343 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms