Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PCDH7O60245 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PCDH7O60245 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.85■□□□□ 0.93
PCDH7O60245 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.85■□□□□ 0.93
PCDH7O60245 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.85■□□□□ 0.93
PCDH7O60245 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.85■□□□□ 0.93
PCDH7O60245 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.85■□□□□ 0.93
PCDH7O60245 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
PCDH7O60245 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDH7O60245 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
PCDH7O60245 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDH7O60245 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDH7O60245 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDH7O60245 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDH7O60245 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PCDH7O60245 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
PCDH7O60245 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.84■□□□□ 0.93
PCDH7O60245 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.84■□□□□ 0.93
PCDH7O60245 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDH7O60245 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDH7O60245 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.84■□□□□ 0.93
PCDH7O60245 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.84■□□□□ 0.93
PCDH7O60245 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.84■□□□□ 0.93
PCDH7O60245 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDH7O60245 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDH7O60245 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PCDH7O60245 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDH7O60245 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDH7O60245 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.83■□□□□ 0.93
PCDH7O60245 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.83■□□□□ 0.93
PCDH7O60245 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PCDH7O60245 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDH7O60245 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.93
PCDH7O60245 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDH7O60245 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
PCDH7O60245 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.83■□□□□ 0.93
PCDH7O60245 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PCDH7O60245 AC092171.4-201ENST00000609130 632 ntBASIC20.83■□□□□ 0.93
PCDH7O60245 CA15P2-201ENST00000611168 834 ntBASIC20.83■□□□□ 0.93
PCDH7O60245 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.83■□□□□ 0.93
PCDH7O60245 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.83■□□□□ 0.92
PCDH7O60245 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.83■□□□□ 0.92
PCDH7O60245 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
PCDH7O60245 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
PCDH7O60245 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.82■□□□□ 0.92
PCDH7O60245 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDH7O60245 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
PCDH7O60245 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDH7O60245 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDH7O60245 MIR3181-201ENST00000578512 73 ntBASIC20.82■□□□□ 0.92
PCDH7O60245 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.82■□□□□ 0.92
PCDH7O60245 C11orf96-202ENST00000528572 1834 ntBASIC20.82■□□□□ 0.92
PCDH7O60245 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDH7O60245 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDH7O60245 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDH7O60245 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDH7O60245 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.82■□□□□ 0.92
PCDH7O60245 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDH7O60245 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDH7O60245 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.82■□□□□ 0.92
PCDH7O60245 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDH7O60245 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDH7O60245 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDH7O60245 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PCDH7O60245 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
PCDH7O60245 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PCDH7O60245 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PCDH7O60245 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDH7O60245 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.81■□□□□ 0.92
PCDH7O60245 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.81■□□□□ 0.92
PCDH7O60245 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDH7O60245 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDH7O60245 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDH7O60245 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDH7O60245 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDH7O60245 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PCDH7O60245 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDH7O60245 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
PCDH7O60245 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.8■□□□□ 0.92
PCDH7O60245 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
PCDH7O60245 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PCDH7O60245 MIR4466-201ENST00000606121 54 ntBASIC20.8■□□□□ 0.92
PCDH7O60245 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.8■□□□□ 0.92
PCDH7O60245 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
PCDH7O60245 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
PCDH7O60245 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PCDH7O60245 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.8■□□□□ 0.92
PCDH7O60245 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PCDH7O60245 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.8■□□□□ 0.92
PCDH7O60245 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDH7O60245 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PCDH7O60245 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDH7O60245 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
PCDH7O60245 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDH7O60245 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.79■□□□□ 0.92
PCDH7O60245 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.79■□□□□ 0.92
PCDH7O60245 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
PCDH7O60245 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
PCDH7O60245 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDH7O60245 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms