Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDLIM1O00151 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDLIM1O00151 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDLIM1O00151 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
PDLIM1O00151 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PDLIM1O00151 AC120024.1-201ENST00000562672 995 ntBASIC20.7■□□□□ 0.9
PDLIM1O00151 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDLIM1O00151 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PDLIM1O00151 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDLIM1O00151 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.7■□□□□ 0.9
PDLIM1O00151 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDLIM1O00151 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDLIM1O00151 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.69■□□□□ 0.9
PDLIM1O00151 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDLIM1O00151 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.69■□□□□ 0.9
PDLIM1O00151 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDLIM1O00151 FAM99A-202ENST00000538190 1989 ntBASIC20.69■□□□□ 0.9
PDLIM1O00151 AC011551.1-201ENST00000614101 683 ntBASIC20.69■□□□□ 0.9
PDLIM1O00151 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.69■□□□□ 0.9
PDLIM1O00151 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDLIM1O00151 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
PDLIM1O00151 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDLIM1O00151 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.68■□□□□ 0.9
PDLIM1O00151 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDLIM1O00151 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
PDLIM1O00151 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDLIM1O00151 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.68■□□□□ 0.9
PDLIM1O00151 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.68■□□□□ 0.9
PDLIM1O00151 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PDLIM1O00151 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDLIM1O00151 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.68■□□□□ 0.9
PDLIM1O00151 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDLIM1O00151 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PDLIM1O00151 AC005229.4-201ENST00000610085 2198 ntBASIC20.68■□□□□ 0.9
PDLIM1O00151 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDLIM1O00151 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDLIM1O00151 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDLIM1O00151 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PDLIM1O00151 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDLIM1O00151 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.67■□□□□ 0.9
PDLIM1O00151 AL353803.4-201ENST00000565882 1934 ntBASIC20.67■□□□□ 0.9
PDLIM1O00151 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDLIM1O00151 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
PDLIM1O00151 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
PDLIM1O00151 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PDLIM1O00151 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PDLIM1O00151 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
PDLIM1O00151 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PDLIM1O00151 AC087742.1-201ENST00000575880 1738 ntBASIC20.67■□□□□ 0.9
PDLIM1O00151 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PDLIM1O00151 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PDLIM1O00151 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PDLIM1O00151 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.66■□□□□ 0.9
PDLIM1O00151 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PDLIM1O00151 THA1P-201ENST00000590384 1145 ntBASIC20.66■□□□□ 0.9
PDLIM1O00151 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PDLIM1O00151 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PDLIM1O00151 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.66■□□□□ 0.9
PDLIM1O00151 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.66■□□□□ 0.9
PDLIM1O00151 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
PDLIM1O00151 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PDLIM1O00151 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.66■□□□□ 0.9
PDLIM1O00151 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.66■□□□□ 0.9
PDLIM1O00151 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.66■□□□□ 0.9
PDLIM1O00151 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PDLIM1O00151 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
PDLIM1O00151 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.65■□□□□ 0.9
PDLIM1O00151 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDLIM1O00151 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
PDLIM1O00151 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDLIM1O00151 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.65■□□□□ 0.9
PDLIM1O00151 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDLIM1O00151 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDLIM1O00151 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.65■□□□□ 0.9
PDLIM1O00151 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.65■□□□□ 0.9
PDLIM1O00151 AC009299.2-201ENST00000482477 511 ntBASIC20.65■□□□□ 0.9
PDLIM1O00151 AL035685.1-201ENST00000636663 812 ntBASIC20.65■□□□□ 0.9
PDLIM1O00151 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PDLIM1O00151 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
PDLIM1O00151 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PDLIM1O00151 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PDLIM1O00151 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.64■□□□□ 0.89
PDLIM1O00151 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PDLIM1O00151 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PDLIM1O00151 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
PDLIM1O00151 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PDLIM1O00151 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.64■□□□□ 0.89
PDLIM1O00151 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PDLIM1O00151 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.64■□□□□ 0.89
PDLIM1O00151 AC010542.4-201ENST00000563151 1910 ntBASIC20.64■□□□□ 0.89
PDLIM1O00151 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
PDLIM1O00151 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
PDLIM1O00151 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
PDLIM1O00151 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
PDLIM1O00151 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
PDLIM1O00151 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.63■□□□□ 0.89
PDLIM1O00151 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.63■□□□□ 0.89
PDLIM1O00151 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDLIM1O00151 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.63■□□□□ 0.89
PDLIM1O00151 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms