Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRIM49D1C9J1S8 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TRIM49D1C9J1S8 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRIM49D1C9J1S8 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.87■■□□□ 1.09
TRIM49D1C9J1S8 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.87■■□□□ 1.09
TRIM49D1C9J1S8 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRIM49D1C9J1S8 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.87■■□□□ 1.09
TRIM49D1C9J1S8 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TRIM49D1C9J1S8 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.86■■□□□ 1.09
TRIM49D1C9J1S8 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
TRIM49D1C9J1S8 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TRIM49D1C9J1S8 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TRIM49D1C9J1S8 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
TRIM49D1C9J1S8 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.86■■□□□ 1.09
TRIM49D1C9J1S8 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TRIM49D1C9J1S8 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
TRIM49D1C9J1S8 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TRIM49D1C9J1S8 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.86■■□□□ 1.09
TRIM49D1C9J1S8 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRIM49D1C9J1S8 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
TRIM49D1C9J1S8 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.85■■□□□ 1.09
TRIM49D1C9J1S8 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
TRIM49D1C9J1S8 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRIM49D1C9J1S8 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
TRIM49D1C9J1S8 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.85■■□□□ 1.09
TRIM49D1C9J1S8 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.85■■□□□ 1.09
TRIM49D1C9J1S8 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.85■■□□□ 1.09
TRIM49D1C9J1S8 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRIM49D1C9J1S8 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRIM49D1C9J1S8 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRIM49D1C9J1S8 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
TRIM49D1C9J1S8 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRIM49D1C9J1S8 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRIM49D1C9J1S8 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
TRIM49D1C9J1S8 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRIM49D1C9J1S8 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.84■■□□□ 1.09
TRIM49D1C9J1S8 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
TRIM49D1C9J1S8 BX664725.1-201ENST00000438252 379 ntBASIC21.84■■□□□ 1.09
TRIM49D1C9J1S8 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRIM49D1C9J1S8 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRIM49D1C9J1S8 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRIM49D1C9J1S8 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRIM49D1C9J1S8 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
TRIM49D1C9J1S8 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.84■■□□□ 1.09
TRIM49D1C9J1S8 AC009102.2-201ENST00000606772 1639 ntBASIC21.84■■□□□ 1.09
TRIM49D1C9J1S8 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRIM49D1C9J1S8 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.83■■□□□ 1.09
TRIM49D1C9J1S8 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRIM49D1C9J1S8 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRIM49D1C9J1S8 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC21.83■■□□□ 1.09
TRIM49D1C9J1S8 CA15P2-201ENST00000611168 834 ntBASIC21.83■■□□□ 1.09
TRIM49D1C9J1S8 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
TRIM49D1C9J1S8 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.83■■□□□ 1.09
TRIM49D1C9J1S8 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.83■■□□□ 1.09
TRIM49D1C9J1S8 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRIM49D1C9J1S8 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.83■■□□□ 1.09
TRIM49D1C9J1S8 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
TRIM49D1C9J1S8 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
TRIM49D1C9J1S8 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM49D1C9J1S8 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM49D1C9J1S8 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM49D1C9J1S8 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.82■■□□□ 1.08
TRIM49D1C9J1S8 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM49D1C9J1S8 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM49D1C9J1S8 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM49D1C9J1S8 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.81■■□□□ 1.08
TRIM49D1C9J1S8 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
TRIM49D1C9J1S8 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM49D1C9J1S8 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.81■■□□□ 1.08
TRIM49D1C9J1S8 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM49D1C9J1S8 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
TRIM49D1C9J1S8 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM49D1C9J1S8 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.81■■□□□ 1.08
TRIM49D1C9J1S8 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.81■■□□□ 1.08
TRIM49D1C9J1S8 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.81■■□□□ 1.08
TRIM49D1C9J1S8 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM49D1C9J1S8 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM49D1C9J1S8 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM49D1C9J1S8 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
TRIM49D1C9J1S8 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM49D1C9J1S8 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM49D1C9J1S8 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM49D1C9J1S8 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM49D1C9J1S8 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM49D1C9J1S8 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
TRIM49D1C9J1S8 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.8■■□□□ 1.08
TRIM49D1C9J1S8 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM49D1C9J1S8 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM49D1C9J1S8 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM49D1C9J1S8 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
TRIM49D1C9J1S8 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
TRIM49D1C9J1S8 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.79■■□□□ 1.08
TRIM49D1C9J1S8 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM49D1C9J1S8 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM49D1C9J1S8 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM49D1C9J1S8 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM49D1C9J1S8 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM49D1C9J1S8 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM49D1C9J1S8 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.79■■□□□ 1.08
TRIM49D1C9J1S8 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms