Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC25.85■■□□□ 1.73
TMEM88BA6NKF7 ECEL1P3-201ENST00000427961 737 ntBASIC25.85■■□□□ 1.73
TMEM88BA6NKF7 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
TMEM88BA6NKF7 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC25.85■■□□□ 1.73
TMEM88BA6NKF7 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC25.85■■□□□ 1.73
TMEM88BA6NKF7 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC25.85■■□□□ 1.73
TMEM88BA6NKF7 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC25.85■■□□□ 1.73
TMEM88BA6NKF7 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
TMEM88BA6NKF7 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
TMEM88BA6NKF7 ASL-203ENST00000380839 1765 ntTSL 5 BASIC25.84■■□□□ 1.73
TMEM88BA6NKF7 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
TMEM88BA6NKF7 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
TMEM88BA6NKF7 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC25.84■■□□□ 1.73
TMEM88BA6NKF7 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC25.84■■□□□ 1.73
TMEM88BA6NKF7 PHB2-213ENST00000546111 858 ntTSL 2 BASIC25.84■■□□□ 1.73
TMEM88BA6NKF7 AC010331.1-201ENST00000611423 582 ntBASIC25.84■■□□□ 1.73
TMEM88BA6NKF7 MMD2-204ENST00000612910 778 ntTSL 5 BASIC25.84■■□□□ 1.73
TMEM88BA6NKF7 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
TMEM88BA6NKF7 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
TMEM88BA6NKF7 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
TMEM88BA6NKF7 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
TMEM88BA6NKF7 SHF-207ENST00000560540 2062 ntTSL 5 BASIC25.83■■□□□ 1.73
TMEM88BA6NKF7 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
TMEM88BA6NKF7 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC25.83■■□□□ 1.73
TMEM88BA6NKF7 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.73
TMEM88BA6NKF7 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
TMEM88BA6NKF7 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC25.83■■□□□ 1.73
TMEM88BA6NKF7 AC008550.1-201ENST00000511500 884 ntBASIC25.83■■□□□ 1.73
TMEM88BA6NKF7 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC25.83■■□□□ 1.73
TMEM88BA6NKF7 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC25.83■■□□□ 1.73
TMEM88BA6NKF7 USP36-216ENST00000589424 970 ntTSL 5 BASIC25.83■■□□□ 1.73
TMEM88BA6NKF7 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
TMEM88BA6NKF7 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC25.83■■□□□ 1.73
TMEM88BA6NKF7 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC25.83■■□□□ 1.73
TMEM88BA6NKF7 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
TMEM88BA6NKF7 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
TMEM88BA6NKF7 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
TMEM88BA6NKF7 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
TMEM88BA6NKF7 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC25.83■■□□□ 1.73
TMEM88BA6NKF7 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC25.82■■□□□ 1.72
TMEM88BA6NKF7 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC25.82■■□□□ 1.72
TMEM88BA6NKF7 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
TMEM88BA6NKF7 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC25.82■■□□□ 1.72
TMEM88BA6NKF7 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
TMEM88BA6NKF7 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC25.82■■□□□ 1.72
TMEM88BA6NKF7 MMAB-206ENST00000540016 945 ntTSL 3 BASIC25.82■■□□□ 1.72
TMEM88BA6NKF7 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC25.82■■□□□ 1.72
TMEM88BA6NKF7 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC25.82■■□□□ 1.72
TMEM88BA6NKF7 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC25.82■■□□□ 1.72
TMEM88BA6NKF7 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
TMEM88BA6NKF7 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC25.82■■□□□ 1.72
TMEM88BA6NKF7 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
TMEM88BA6NKF7 AC005224.4-201ENST00000583262 1652 ntBASIC25.81■■□□□ 1.72
TMEM88BA6NKF7 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC25.81■■□□□ 1.72
TMEM88BA6NKF7 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
TMEM88BA6NKF7 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC25.81■■□□□ 1.72
TMEM88BA6NKF7 AC083880.1-201ENST00000608266 535 ntBASIC25.81■■□□□ 1.72
TMEM88BA6NKF7 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC25.81■■□□□ 1.72
TMEM88BA6NKF7 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
TMEM88BA6NKF7 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
TMEM88BA6NKF7 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC25.8■■□□□ 1.72
TMEM88BA6NKF7 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC25.8■■□□□ 1.72
TMEM88BA6NKF7 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC25.8■■□□□ 1.72
TMEM88BA6NKF7 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC25.8■■□□□ 1.72
TMEM88BA6NKF7 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC25.8■■□□□ 1.72
TMEM88BA6NKF7 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC25.8■■□□□ 1.72
TMEM88BA6NKF7 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
TMEM88BA6NKF7 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
TMEM88BA6NKF7 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
TMEM88BA6NKF7 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
TMEM88BA6NKF7 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
TMEM88BA6NKF7 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC25.78■■□□□ 1.72
TMEM88BA6NKF7 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC25.78■■□□□ 1.72
TMEM88BA6NKF7 GAS7-202ENST00000396115 929 ntTSL 5 BASIC25.78■■□□□ 1.72
TMEM88BA6NKF7 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
TMEM88BA6NKF7 MAX-217ENST00000557277 728 ntTSL 3 BASIC25.78■■□□□ 1.72
TMEM88BA6NKF7 AC073912.3-201ENST00000624414 853 ntBASIC25.78■■□□□ 1.72
TMEM88BA6NKF7 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC25.78■■□□□ 1.72
TMEM88BA6NKF7 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
TMEM88BA6NKF7 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
TMEM88BA6NKF7 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC25.77■■□□□ 1.72
TMEM88BA6NKF7 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC25.77■■□□□ 1.72
TMEM88BA6NKF7 BET1L-204ENST00000410108 637 ntTSL 3 BASIC25.77■■□□□ 1.72
TMEM88BA6NKF7 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC25.77■■□□□ 1.72
TMEM88BA6NKF7 CYP2T1P-201ENST00000432607 1285 ntBASIC25.77■■□□□ 1.72
TMEM88BA6NKF7 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC25.77■■□□□ 1.72
TMEM88BA6NKF7 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC25.77■■□□□ 1.72
TMEM88BA6NKF7 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC25.77■■□□□ 1.72
TMEM88BA6NKF7 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC25.77■■□□□ 1.72
TMEM88BA6NKF7 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC25.77■■□□□ 1.72
TMEM88BA6NKF7 AC013268.1-206ENST00000638368 961 ntBASIC25.77■■□□□ 1.72
TMEM88BA6NKF7 AC112229.1-201ENST00000639295 961 ntBASIC25.77■■□□□ 1.72
TMEM88BA6NKF7 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
TMEM88BA6NKF7 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
TMEM88BA6NKF7 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC25.76■■□□□ 1.71
TMEM88BA6NKF7 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC25.76■■□□□ 1.71
TMEM88BA6NKF7 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC25.76■■□□□ 1.71
TMEM88BA6NKF7 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC25.76■■□□□ 1.71
TMEM88BA6NKF7 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
TMEM88BA6NKF7 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms