Protein–RNA interactions for Protein: A6NHP3

SPDYE2B, Speedy protein E2B, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE2BA6NHP3 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SPDYE2BA6NHP3 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SPDYE2BA6NHP3 NCF1B-203ENST00000435988 1254 ntBASIC26.17■■□□□ 1.78
SPDYE2BA6NHP3 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SPDYE2BA6NHP3 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC26.17■■□□□ 1.78
SPDYE2BA6NHP3 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SPDYE2BA6NHP3 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC26.17■■□□□ 1.78
SPDYE2BA6NHP3 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
SPDYE2BA6NHP3 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC26.17■■□□□ 1.78
SPDYE2BA6NHP3 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SPDYE2BA6NHP3 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
SPDYE2BA6NHP3 AL139125.2-201ENST00000623134 1869 ntBASIC26.17■■□□□ 1.78
SPDYE2BA6NHP3 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC26.17■■□□□ 1.78
SPDYE2BA6NHP3 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
SPDYE2BA6NHP3 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SPDYE2BA6NHP3 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
SPDYE2BA6NHP3 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC26.16■■□□□ 1.78
SPDYE2BA6NHP3 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SPDYE2BA6NHP3 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC26.16■■□□□ 1.78
SPDYE2BA6NHP3 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
SPDYE2BA6NHP3 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
SPDYE2BA6NHP3 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SPDYE2BA6NHP3 AL109923.1-201ENST00000618799 583 ntBASIC26.16■■□□□ 1.78
SPDYE2BA6NHP3 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC26.16■■□□□ 1.78
SPDYE2BA6NHP3 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC26.16■■□□□ 1.78
SPDYE2BA6NHP3 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SPDYE2BA6NHP3 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
SPDYE2BA6NHP3 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC26.15■■□□□ 1.78
SPDYE2BA6NHP3 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC26.15■■□□□ 1.78
SPDYE2BA6NHP3 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC26.14■■□□□ 1.78
SPDYE2BA6NHP3 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
SPDYE2BA6NHP3 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC26.14■■□□□ 1.78
SPDYE2BA6NHP3 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
SPDYE2BA6NHP3 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
SPDYE2BA6NHP3 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
SPDYE2BA6NHP3 ABCB10P4-201ENST00000566803 2184 ntBASIC26.14■■□□□ 1.77
SPDYE2BA6NHP3 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
SPDYE2BA6NHP3 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
SPDYE2BA6NHP3 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
SPDYE2BA6NHP3 MIR663A-201ENST00000385250 93 ntBASIC26.13■■□□□ 1.77
SPDYE2BA6NHP3 AL355802.2-201ENST00000402069 882 ntBASIC26.13■■□□□ 1.77
SPDYE2BA6NHP3 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC26.13■■□□□ 1.77
SPDYE2BA6NHP3 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC26.13■■□□□ 1.77
SPDYE2BA6NHP3 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SPDYE2BA6NHP3 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SPDYE2BA6NHP3 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
SPDYE2BA6NHP3 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC26.12■■□□□ 1.77
SPDYE2BA6NHP3 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
SPDYE2BA6NHP3 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC26.12■■□□□ 1.77
SPDYE2BA6NHP3 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SPDYE2BA6NHP3 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC26.12■■□□□ 1.77
SPDYE2BA6NHP3 MFSD11-216ENST00000590393 1141 ntBASIC26.12■■□□□ 1.77
SPDYE2BA6NHP3 DUSP8P3-201ENST00000399571 1760 ntBASIC26.12■■□□□ 1.77
SPDYE2BA6NHP3 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC26.12■■□□□ 1.77
SPDYE2BA6NHP3 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC26.11■■□□□ 1.77
SPDYE2BA6NHP3 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC26.11■■□□□ 1.77
SPDYE2BA6NHP3 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
SPDYE2BA6NHP3 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
SPDYE2BA6NHP3 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
SPDYE2BA6NHP3 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC26.11■■□□□ 1.77
SPDYE2BA6NHP3 MDK-213ENST00000617138 635 ntTSL 2 BASIC26.11■■□□□ 1.77
SPDYE2BA6NHP3 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC26.11■■□□□ 1.77
SPDYE2BA6NHP3 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
SPDYE2BA6NHP3 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
SPDYE2BA6NHP3 AC005224.4-201ENST00000583262 1652 ntBASIC26.1■■□□□ 1.77
SPDYE2BA6NHP3 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC26.1■■□□□ 1.77
SPDYE2BA6NHP3 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC26.1■■□□□ 1.77
SPDYE2BA6NHP3 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC26.1■■□□□ 1.77
SPDYE2BA6NHP3 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC26.1■■□□□ 1.77
SPDYE2BA6NHP3 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC26.1■■□□□ 1.77
SPDYE2BA6NHP3 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
SPDYE2BA6NHP3 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
SPDYE2BA6NHP3 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
SPDYE2BA6NHP3 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
SPDYE2BA6NHP3 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC26.09■■□□□ 1.77
SPDYE2BA6NHP3 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC26.09■■□□□ 1.77
SPDYE2BA6NHP3 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
SPDYE2BA6NHP3 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC26.09■■□□□ 1.77
SPDYE2BA6NHP3 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC26.09■■□□□ 1.77
SPDYE2BA6NHP3 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
SPDYE2BA6NHP3 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
SPDYE2BA6NHP3 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC26.08■■□□□ 1.77
SPDYE2BA6NHP3 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC26.08■■□□□ 1.77
SPDYE2BA6NHP3 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC26.08■■□□□ 1.77
SPDYE2BA6NHP3 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC26.08■■□□□ 1.77
SPDYE2BA6NHP3 WT1-AS_3.1-201ENST00000613262 234 ntBASIC26.08■■□□□ 1.77
SPDYE2BA6NHP3 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC26.08■■□□□ 1.77
SPDYE2BA6NHP3 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC26.08■■□□□ 1.77
SPDYE2BA6NHP3 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
SPDYE2BA6NHP3 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
SPDYE2BA6NHP3 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC26.07■■□□□ 1.76
SPDYE2BA6NHP3 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
SPDYE2BA6NHP3 KRT87P-202ENST00000534226 1464 ntBASIC26.07■■□□□ 1.76
SPDYE2BA6NHP3 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC26.07■■□□□ 1.76
SPDYE2BA6NHP3 AC104187.1-201ENST00000607510 612 ntBASIC26.07■■□□□ 1.76
SPDYE2BA6NHP3 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
SPDYE2BA6NHP3 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC26.07■■□□□ 1.76
SPDYE2BA6NHP3 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC26.07■■□□□ 1.76
SPDYE2BA6NHP3 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
SPDYE2BA6NHP3 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC26.06■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms