Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TBC1D3BA6NDS4 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
TBC1D3BA6NDS4 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
TBC1D3BA6NDS4 AC016769.1-201ENST00000409132 1010 ntBASIC22.27■■□□□ 1.16
TBC1D3BA6NDS4 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
TBC1D3BA6NDS4 AC137761.2-201ENST00000561729 223 ntBASIC22.27■■□□□ 1.16
TBC1D3BA6NDS4 AC145350.3-201ENST00000569033 163 ntBASIC22.27■■□□□ 1.16
TBC1D3BA6NDS4 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC22.27■■□□□ 1.16
TBC1D3BA6NDS4 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TBC1D3BA6NDS4 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TBC1D3BA6NDS4 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC22.27■■□□□ 1.16
TBC1D3BA6NDS4 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC22.27■■□□□ 1.15
TBC1D3BA6NDS4 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TBC1D3BA6NDS4 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
TBC1D3BA6NDS4 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC22.26■■□□□ 1.15
TBC1D3BA6NDS4 KRT18P61-201ENST00000585825 1298 ntBASIC22.26■■□□□ 1.15
TBC1D3BA6NDS4 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
TBC1D3BA6NDS4 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TBC1D3BA6NDS4 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC22.26■■□□□ 1.15
TBC1D3BA6NDS4 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TBC1D3BA6NDS4 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC22.26■■□□□ 1.15
TBC1D3BA6NDS4 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
TBC1D3BA6NDS4 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
TBC1D3BA6NDS4 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC22.25■■□□□ 1.15
TBC1D3BA6NDS4 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
TBC1D3BA6NDS4 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
TBC1D3BA6NDS4 AP004607.4-201ENST00000530158 1459 ntBASIC22.25■■□□□ 1.15
TBC1D3BA6NDS4 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
TBC1D3BA6NDS4 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
TBC1D3BA6NDS4 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TBC1D3BA6NDS4 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
TBC1D3BA6NDS4 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC22.25■■□□□ 1.15
TBC1D3BA6NDS4 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
TBC1D3BA6NDS4 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TBC1D3BA6NDS4 ANOS2P-203ENST00000472227 1816 ntBASIC22.24■■□□□ 1.15
TBC1D3BA6NDS4 AC004854.2-201ENST00000608450 1441 ntBASIC22.24■■□□□ 1.15
TBC1D3BA6NDS4 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TBC1D3BA6NDS4 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
TBC1D3BA6NDS4 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
TBC1D3BA6NDS4 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TBC1D3BA6NDS4 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC22.24■■□□□ 1.15
TBC1D3BA6NDS4 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
TBC1D3BA6NDS4 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC22.24■■□□□ 1.15
TBC1D3BA6NDS4 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
TBC1D3BA6NDS4 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TBC1D3BA6NDS4 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC22.23■■□□□ 1.15
TBC1D3BA6NDS4 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
TBC1D3BA6NDS4 DUSP8P3-201ENST00000399571 1760 ntBASIC22.23■■□□□ 1.15
TBC1D3BA6NDS4 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
TBC1D3BA6NDS4 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC22.23■■□□□ 1.15
TBC1D3BA6NDS4 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC22.23■■□□□ 1.15
TBC1D3BA6NDS4 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
TBC1D3BA6NDS4 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC22.23■■□□□ 1.15
TBC1D3BA6NDS4 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
TBC1D3BA6NDS4 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC22.23■■□□□ 1.15
TBC1D3BA6NDS4 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TBC1D3BA6NDS4 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
TBC1D3BA6NDS4 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TBC1D3BA6NDS4 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TBC1D3BA6NDS4 ASL-203ENST00000380839 1765 ntTSL 5 BASIC22.22■■□□□ 1.15
TBC1D3BA6NDS4 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC22.22■■□□□ 1.15
TBC1D3BA6NDS4 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
TBC1D3BA6NDS4 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC22.22■■□□□ 1.15
TBC1D3BA6NDS4 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC22.22■■□□□ 1.15
TBC1D3BA6NDS4 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TBC1D3BA6NDS4 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
TBC1D3BA6NDS4 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
TBC1D3BA6NDS4 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC22.21■■□□□ 1.15
TBC1D3BA6NDS4 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TBC1D3BA6NDS4 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
TBC1D3BA6NDS4 STX7-201ENST00000367937 1090 ntTSL 5 BASIC22.21■■□□□ 1.15
TBC1D3BA6NDS4 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC22.21■■□□□ 1.15
TBC1D3BA6NDS4 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC22.21■■□□□ 1.15
TBC1D3BA6NDS4 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC22.21■■□□□ 1.15
TBC1D3BA6NDS4 AC006015.1-201ENST00000429970 570 ntBASIC22.21■■□□□ 1.15
TBC1D3BA6NDS4 DBI-210ENST00000542275 757 ntTSL 5 BASIC22.21■■□□□ 1.15
TBC1D3BA6NDS4 AC080038.1-201ENST00000611274 1154 ntBASIC22.21■■□□□ 1.15
TBC1D3BA6NDS4 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
TBC1D3BA6NDS4 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TBC1D3BA6NDS4 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
TBC1D3BA6NDS4 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC22.21■■□□□ 1.15
TBC1D3BA6NDS4 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TBC1D3BA6NDS4 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
TBC1D3BA6NDS4 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC22.2■■□□□ 1.14
TBC1D3BA6NDS4 KRT19P1-201ENST00000405746 1186 ntBASIC22.2■■□□□ 1.14
TBC1D3BA6NDS4 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC22.2■■□□□ 1.14
TBC1D3BA6NDS4 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC22.2■■□□□ 1.14
TBC1D3BA6NDS4 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
TBC1D3BA6NDS4 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC22.2■■□□□ 1.14
TBC1D3BA6NDS4 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC22.2■■□□□ 1.14
TBC1D3BA6NDS4 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC22.2■■□□□ 1.14
TBC1D3BA6NDS4 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
TBC1D3BA6NDS4 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC22.2■■□□□ 1.14
TBC1D3BA6NDS4 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC22.19■■□□□ 1.14
TBC1D3BA6NDS4 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
TBC1D3BA6NDS4 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
TBC1D3BA6NDS4 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC22.19■■□□□ 1.14
TBC1D3BA6NDS4 ID1-201ENST00000376105 1233 ntBASIC22.19■■□□□ 1.14
TBC1D3BA6NDS4 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC22.19■■□□□ 1.14
TBC1D3BA6NDS4 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC22.19■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms