Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 GUSBP5-202ENST00000510805 1989 ntBASIC25.43■■□□□ 1.66
CCDC196A0A1B0GTZ2 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
CCDC196A0A1B0GTZ2 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
CCDC196A0A1B0GTZ2 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC25.42■■□□□ 1.66
CCDC196A0A1B0GTZ2 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
CCDC196A0A1B0GTZ2 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
CCDC196A0A1B0GTZ2 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC25.42■■□□□ 1.66
CCDC196A0A1B0GTZ2 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
CCDC196A0A1B0GTZ2 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
CCDC196A0A1B0GTZ2 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC25.42■■□□□ 1.66
CCDC196A0A1B0GTZ2 AL117328.2-201ENST00000624617 1940 ntBASIC25.41■■□□□ 1.66
CCDC196A0A1B0GTZ2 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC25.41■■□□□ 1.66
CCDC196A0A1B0GTZ2 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC25.41■■□□□ 1.66
CCDC196A0A1B0GTZ2 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
CCDC196A0A1B0GTZ2 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CCDC196A0A1B0GTZ2 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC25.41■■□□□ 1.66
CCDC196A0A1B0GTZ2 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC25.41■■□□□ 1.66
CCDC196A0A1B0GTZ2 GRAMD4P4-201ENST00000613563 1115 ntBASIC25.41■■□□□ 1.66
CCDC196A0A1B0GTZ2 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC25.41■■□□□ 1.66
CCDC196A0A1B0GTZ2 AC137767.1-201ENST00000602918 1920 ntBASIC25.41■■□□□ 1.66
CCDC196A0A1B0GTZ2 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC25.41■■□□□ 1.66
CCDC196A0A1B0GTZ2 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
CCDC196A0A1B0GTZ2 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
CCDC196A0A1B0GTZ2 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CCDC196A0A1B0GTZ2 AC242852.2-201ENST00000615738 1807 ntBASIC25.4■■□□□ 1.66
CCDC196A0A1B0GTZ2 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
CCDC196A0A1B0GTZ2 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
CCDC196A0A1B0GTZ2 AC010141.3-201ENST00000456659 717 ntBASIC25.4■■□□□ 1.66
CCDC196A0A1B0GTZ2 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC25.4■■□□□ 1.66
CCDC196A0A1B0GTZ2 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
CCDC196A0A1B0GTZ2 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
CCDC196A0A1B0GTZ2 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CCDC196A0A1B0GTZ2 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CCDC196A0A1B0GTZ2 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
CCDC196A0A1B0GTZ2 TERT-206ENST00000508104 2486 ntTSL 5 BASIC25.39■■□□□ 1.66
CCDC196A0A1B0GTZ2 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
CCDC196A0A1B0GTZ2 AC027682.1-201ENST00000562846 899 ntBASIC25.39■■□□□ 1.66
CCDC196A0A1B0GTZ2 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
CCDC196A0A1B0GTZ2 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
CCDC196A0A1B0GTZ2 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.65
CCDC196A0A1B0GTZ2 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
CCDC196A0A1B0GTZ2 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CCDC196A0A1B0GTZ2 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC25.38■■□□□ 1.65
CCDC196A0A1B0GTZ2 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC25.38■■□□□ 1.65
CCDC196A0A1B0GTZ2 MPST-208ENST00000628507 698 ntTSL 5 BASIC25.38■■□□□ 1.65
CCDC196A0A1B0GTZ2 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC25.38■■□□□ 1.65
CCDC196A0A1B0GTZ2 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
CCDC196A0A1B0GTZ2 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CCDC196A0A1B0GTZ2 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CCDC196A0A1B0GTZ2 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
CCDC196A0A1B0GTZ2 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CCDC196A0A1B0GTZ2 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC25.37■■□□□ 1.65
CCDC196A0A1B0GTZ2 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CCDC196A0A1B0GTZ2 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CCDC196A0A1B0GTZ2 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC25.37■■□□□ 1.65
CCDC196A0A1B0GTZ2 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC25.37■■□□□ 1.65
CCDC196A0A1B0GTZ2 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CCDC196A0A1B0GTZ2 AC008764.7-201ENST00000593779 1081 ntBASIC25.37■■□□□ 1.65
CCDC196A0A1B0GTZ2 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC25.37■■□□□ 1.65
CCDC196A0A1B0GTZ2 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC25.37■■□□□ 1.65
CCDC196A0A1B0GTZ2 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
CCDC196A0A1B0GTZ2 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CCDC196A0A1B0GTZ2 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CCDC196A0A1B0GTZ2 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CCDC196A0A1B0GTZ2 AP001330.3-201ENST00000520123 633 ntBASIC25.36■■□□□ 1.65
CCDC196A0A1B0GTZ2 AC126544.1-201ENST00000580842 1059 ntBASIC25.36■■□□□ 1.65
CCDC196A0A1B0GTZ2 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC25.36■■□□□ 1.65
CCDC196A0A1B0GTZ2 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
CCDC196A0A1B0GTZ2 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
CCDC196A0A1B0GTZ2 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
CCDC196A0A1B0GTZ2 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC25.35■■□□□ 1.65
CCDC196A0A1B0GTZ2 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CCDC196A0A1B0GTZ2 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CCDC196A0A1B0GTZ2 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CCDC196A0A1B0GTZ2 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CCDC196A0A1B0GTZ2 AC079089.2-201ENST00000531211 1277 ntBASIC25.35■■□□□ 1.65
CCDC196A0A1B0GTZ2 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC25.35■■□□□ 1.65
CCDC196A0A1B0GTZ2 AL031432.3-201ENST00000607698 485 ntBASIC25.35■■□□□ 1.65
CCDC196A0A1B0GTZ2 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC25.35■■□□□ 1.65
CCDC196A0A1B0GTZ2 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CCDC196A0A1B0GTZ2 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
CCDC196A0A1B0GTZ2 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC25.35■■□□□ 1.65
CCDC196A0A1B0GTZ2 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
CCDC196A0A1B0GTZ2 AC080038.3-201ENST00000623346 1952 ntBASIC25.35■■□□□ 1.65
CCDC196A0A1B0GTZ2 ECEL1P1-201ENST00000373592 1742 ntBASIC25.34■■□□□ 1.65
CCDC196A0A1B0GTZ2 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC25.34■■□□□ 1.65
CCDC196A0A1B0GTZ2 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CCDC196A0A1B0GTZ2 OXCT2P1-201ENST00000447263 1535 ntBASIC25.34■■□□□ 1.65
CCDC196A0A1B0GTZ2 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
CCDC196A0A1B0GTZ2 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
CCDC196A0A1B0GTZ2 MIR939-201ENST00000401314 82 ntBASIC25.34■■□□□ 1.65
CCDC196A0A1B0GTZ2 AC099791.1-201ENST00000416440 715 ntBASIC25.34■■□□□ 1.65
CCDC196A0A1B0GTZ2 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
CCDC196A0A1B0GTZ2 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC25.34■■□□□ 1.65
CCDC196A0A1B0GTZ2 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC25.33■■□□□ 1.65
CCDC196A0A1B0GTZ2 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CCDC196A0A1B0GTZ2 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC25.33■■□□□ 1.65
CCDC196A0A1B0GTZ2 AC139530.1-201ENST00000575312 1977 ntBASIC25.33■■□□□ 1.65
CCDC196A0A1B0GTZ2 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC25.33■■□□□ 1.65
CCDC196A0A1B0GTZ2 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC25.33■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms