Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV27A0A0K0K1C4 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV27A0A0K0K1C4 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC15.42■□□□□ 0.06
TRBV27A0A0K0K1C4 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC15.42■□□□□ 0.06
TRBV27A0A0K0K1C4 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC15.42■□□□□ 0.06
TRBV27A0A0K0K1C4 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TRBV27A0A0K0K1C4 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV27A0A0K0K1C4 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV27A0A0K0K1C4 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV27A0A0K0K1C4 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC15.42■□□□□ 0.06
TRBV27A0A0K0K1C4 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV27A0A0K0K1C4 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV27A0A0K0K1C4 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC15.42■□□□□ 0.06
TRBV27A0A0K0K1C4 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV27A0A0K0K1C4 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV27A0A0K0K1C4 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
TRBV27A0A0K0K1C4 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV27A0A0K0K1C4 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV27A0A0K0K1C4 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV27A0A0K0K1C4 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC15.41■□□□□ 0.06
TRBV27A0A0K0K1C4 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV27A0A0K0K1C4 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV27A0A0K0K1C4 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC15.41■□□□□ 0.06
TRBV27A0A0K0K1C4 DUX4L18-201ENST00000553347 1267 ntBASIC15.41■□□□□ 0.06
TRBV27A0A0K0K1C4 BHLHE23-202ENST00000612929 1109 ntBASIC15.41■□□□□ 0.06
TRBV27A0A0K0K1C4 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC15.41■□□□□ 0.06
TRBV27A0A0K0K1C4 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV27A0A0K0K1C4 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC15.41■□□□□ 0.06
TRBV27A0A0K0K1C4 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV27A0A0K0K1C4 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV27A0A0K0K1C4 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV27A0A0K0K1C4 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC15.4■□□□□ 0.06
TRBV27A0A0K0K1C4 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TRBV27A0A0K0K1C4 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV27A0A0K0K1C4 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV27A0A0K0K1C4 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV27A0A0K0K1C4 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV27A0A0K0K1C4 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV27A0A0K0K1C4 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV27A0A0K0K1C4 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC15.4■□□□□ 0.06
TRBV27A0A0K0K1C4 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
TRBV27A0A0K0K1C4 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
TRBV27A0A0K0K1C4 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV27A0A0K0K1C4 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
TRBV27A0A0K0K1C4 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV27A0A0K0K1C4 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC15.4■□□□□ 0.06
TRBV27A0A0K0K1C4 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC15.4■□□□□ 0.06
TRBV27A0A0K0K1C4 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC15.4■□□□□ 0.06
TRBV27A0A0K0K1C4 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
TRBV27A0A0K0K1C4 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV27A0A0K0K1C4 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV27A0A0K0K1C4 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV27A0A0K0K1C4 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC15.4■□□□□ 0.06
TRBV27A0A0K0K1C4 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV27A0A0K0K1C4 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC15.39■□□□□ 0.05
TRBV27A0A0K0K1C4 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV27A0A0K0K1C4 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TRBV27A0A0K0K1C4 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV27A0A0K0K1C4 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV27A0A0K0K1C4 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
TRBV27A0A0K0K1C4 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV27A0A0K0K1C4 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV27A0A0K0K1C4 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV27A0A0K0K1C4 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC15.39■□□□□ 0.05
TRBV27A0A0K0K1C4 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV27A0A0K0K1C4 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC15.39■□□□□ 0.05
TRBV27A0A0K0K1C4 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV27A0A0K0K1C4 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV27A0A0K0K1C4 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV27A0A0K0K1C4 AC005703.6-201ENST00000623265 1329 ntBASIC15.39■□□□□ 0.05
TRBV27A0A0K0K1C4 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV27A0A0K0K1C4 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV27A0A0K0K1C4 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
TRBV27A0A0K0K1C4 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV27A0A0K0K1C4 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV27A0A0K0K1C4 Z98882.1-201ENST00000622160 2253 ntBASIC15.38■□□□□ 0.05
TRBV27A0A0K0K1C4 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
TRBV27A0A0K0K1C4 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV27A0A0K0K1C4 ASB1-202ENST00000409297 878 ntTSL 5 BASIC15.38■□□□□ 0.05
TRBV27A0A0K0K1C4 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC15.38■□□□□ 0.05
TRBV27A0A0K0K1C4 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV27A0A0K0K1C4 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV27A0A0K0K1C4 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV27A0A0K0K1C4 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
TRBV27A0A0K0K1C4 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV27A0A0K0K1C4 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV27A0A0K0K1C4 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
TRBV27A0A0K0K1C4 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC15.38■□□□□ 0.05
TRBV27A0A0K0K1C4 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC15.38■□□□□ 0.05
TRBV27A0A0K0K1C4 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV27A0A0K0K1C4 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV27A0A0K0K1C4 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
TRBV27A0A0K0K1C4 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV27A0A0K0K1C4 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV27A0A0K0K1C4 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
TRBV27A0A0K0K1C4 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC15.37■□□□□ 0.05
TRBV27A0A0K0K1C4 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV27A0A0K0K1C4 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV27A0A0K0K1C4 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC15.37■□□□□ 0.05
TRBV27A0A0K0K1C4 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms