Protein–RNA interactions for Protein: A0A0K0K1C0

TRBV11-1, T-cell receptor beta variable 11-1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV11-1A0A0K0K1C0 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRBV11-1A0A0K0K1C0 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRBV11-1A0A0K0K1C0 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.24■□□□□ 0.83
TRBV11-1A0A0K0K1C0 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRBV11-1A0A0K0K1C0 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
TRBV11-1A0A0K0K1C0 AC097381.1-201ENST00000429019 1296 ntBASIC20.23■□□□□ 0.83
TRBV11-1A0A0K0K1C0 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TRBV11-1A0A0K0K1C0 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TRBV11-1A0A0K0K1C0 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.23■□□□□ 0.83
TRBV11-1A0A0K0K1C0 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.23■□□□□ 0.83
TRBV11-1A0A0K0K1C0 MIR6821-201ENST00000617625 74 ntBASIC20.23■□□□□ 0.83
TRBV11-1A0A0K0K1C0 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
TRBV11-1A0A0K0K1C0 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRBV11-1A0A0K0K1C0 OXCT2P1-201ENST00000447263 1535 ntBASIC20.22■□□□□ 0.83
TRBV11-1A0A0K0K1C0 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRBV11-1A0A0K0K1C0 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRBV11-1A0A0K0K1C0 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.22■□□□□ 0.83
TRBV11-1A0A0K0K1C0 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRBV11-1A0A0K0K1C0 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
TRBV11-1A0A0K0K1C0 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRBV11-1A0A0K0K1C0 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRBV11-1A0A0K0K1C0 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRBV11-1A0A0K0K1C0 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRBV11-1A0A0K0K1C0 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.22■□□□□ 0.83
TRBV11-1A0A0K0K1C0 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.22■□□□□ 0.83
TRBV11-1A0A0K0K1C0 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.22■□□□□ 0.83
TRBV11-1A0A0K0K1C0 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.22■□□□□ 0.83
TRBV11-1A0A0K0K1C0 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRBV11-1A0A0K0K1C0 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRBV11-1A0A0K0K1C0 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.21■□□□□ 0.83
TRBV11-1A0A0K0K1C0 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRBV11-1A0A0K0K1C0 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRBV11-1A0A0K0K1C0 AC027612.3-201ENST00000413684 1047 ntBASIC20.21■□□□□ 0.83
TRBV11-1A0A0K0K1C0 YBX1P1-201ENST00000445822 960 ntBASIC20.21■□□□□ 0.83
TRBV11-1A0A0K0K1C0 AC087623.3-201ENST00000607047 1098 ntBASIC20.21■□□□□ 0.83
TRBV11-1A0A0K0K1C0 MIR5787-201ENST00000611784 55 ntBASIC20.21■□□□□ 0.83
TRBV11-1A0A0K0K1C0 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRBV11-1A0A0K0K1C0 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
TRBV11-1A0A0K0K1C0 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.21■□□□□ 0.83
TRBV11-1A0A0K0K1C0 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRBV11-1A0A0K0K1C0 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRBV11-1A0A0K0K1C0 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRBV11-1A0A0K0K1C0 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRBV11-1A0A0K0K1C0 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRBV11-1A0A0K0K1C0 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.2■□□□□ 0.82
TRBV11-1A0A0K0K1C0 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.2■□□□□ 0.82
TRBV11-1A0A0K0K1C0 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.2■□□□□ 0.82
TRBV11-1A0A0K0K1C0 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
TRBV11-1A0A0K0K1C0 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.2■□□□□ 0.82
TRBV11-1A0A0K0K1C0 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
TRBV11-1A0A0K0K1C0 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRBV11-1A0A0K0K1C0 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRBV11-1A0A0K0K1C0 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRBV11-1A0A0K0K1C0 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRBV11-1A0A0K0K1C0 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.19■□□□□ 0.82
TRBV11-1A0A0K0K1C0 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
TRBV11-1A0A0K0K1C0 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.19■□□□□ 0.82
TRBV11-1A0A0K0K1C0 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
TRBV11-1A0A0K0K1C0 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.19■□□□□ 0.82
TRBV11-1A0A0K0K1C0 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.19■□□□□ 0.82
TRBV11-1A0A0K0K1C0 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRBV11-1A0A0K0K1C0 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.19■□□□□ 0.82
TRBV11-1A0A0K0K1C0 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.19■□□□□ 0.82
TRBV11-1A0A0K0K1C0 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRBV11-1A0A0K0K1C0 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.19■□□□□ 0.82
TRBV11-1A0A0K0K1C0 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.19■□□□□ 0.82
TRBV11-1A0A0K0K1C0 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRBV11-1A0A0K0K1C0 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRBV11-1A0A0K0K1C0 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRBV11-1A0A0K0K1C0 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRBV11-1A0A0K0K1C0 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRBV11-1A0A0K0K1C0 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
TRBV11-1A0A0K0K1C0 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRBV11-1A0A0K0K1C0 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.18■□□□□ 0.82
TRBV11-1A0A0K0K1C0 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.18■□□□□ 0.82
TRBV11-1A0A0K0K1C0 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.18■□□□□ 0.82
TRBV11-1A0A0K0K1C0 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.18■□□□□ 0.82
TRBV11-1A0A0K0K1C0 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRBV11-1A0A0K0K1C0 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
TRBV11-1A0A0K0K1C0 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.18■□□□□ 0.82
TRBV11-1A0A0K0K1C0 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRBV11-1A0A0K0K1C0 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.18■□□□□ 0.82
TRBV11-1A0A0K0K1C0 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRBV11-1A0A0K0K1C0 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.17■□□□□ 0.82
TRBV11-1A0A0K0K1C0 SMUG1P1-201ENST00000590640 811 ntBASIC20.17■□□□□ 0.82
TRBV11-1A0A0K0K1C0 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRBV11-1A0A0K0K1C0 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRBV11-1A0A0K0K1C0 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
TRBV11-1A0A0K0K1C0 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.17■□□□□ 0.82
TRBV11-1A0A0K0K1C0 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRBV11-1A0A0K0K1C0 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
TRBV11-1A0A0K0K1C0 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
TRBV11-1A0A0K0K1C0 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
TRBV11-1A0A0K0K1C0 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.16■□□□□ 0.82
TRBV11-1A0A0K0K1C0 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRBV11-1A0A0K0K1C0 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRBV11-1A0A0K0K1C0 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
TRBV11-1A0A0K0K1C0 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRBV11-1A0A0K0K1C0 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRBV11-1A0A0K0K1C0 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms