Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TRBV5-4A0A0C4DH59 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
TRBV5-4A0A0C4DH59 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TRBV5-4A0A0C4DH59 ECEL1P1-201ENST00000373592 1742 ntBASIC21.61■■□□□ 1.05
TRBV5-4A0A0C4DH59 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRBV5-4A0A0C4DH59 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TRBV5-4A0A0C4DH59 AC087239.1-201ENST00000622671 572 ntBASIC21.61■■□□□ 1.05
TRBV5-4A0A0C4DH59 AL136967.2-201ENST00000623968 743 ntBASIC21.61■■□□□ 1.05
TRBV5-4A0A0C4DH59 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRBV5-4A0A0C4DH59 AC139530.1-201ENST00000575312 1977 ntBASIC21.61■■□□□ 1.05
TRBV5-4A0A0C4DH59 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
TRBV5-4A0A0C4DH59 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRBV5-4A0A0C4DH59 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRBV5-4A0A0C4DH59 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.6■■□□□ 1.05
TRBV5-4A0A0C4DH59 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TRBV5-4A0A0C4DH59 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
TRBV5-4A0A0C4DH59 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
TRBV5-4A0A0C4DH59 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.6■■□□□ 1.05
TRBV5-4A0A0C4DH59 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRBV5-4A0A0C4DH59 AC099791.1-201ENST00000416440 715 ntBASIC21.6■■□□□ 1.05
TRBV5-4A0A0C4DH59 AF213884.3-201ENST00000563833 479 ntBASIC21.6■■□□□ 1.05
TRBV5-4A0A0C4DH59 AC008764.7-201ENST00000593779 1081 ntBASIC21.6■■□□□ 1.05
TRBV5-4A0A0C4DH59 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TRBV5-4A0A0C4DH59 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.6■■□□□ 1.05
TRBV5-4A0A0C4DH59 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.6■■□□□ 1.05
TRBV5-4A0A0C4DH59 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TRBV5-4A0A0C4DH59 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
TRBV5-4A0A0C4DH59 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRBV5-4A0A0C4DH59 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRBV5-4A0A0C4DH59 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRBV5-4A0A0C4DH59 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRBV5-4A0A0C4DH59 AC079089.2-201ENST00000531211 1277 ntBASIC21.59■■□□□ 1.05
TRBV5-4A0A0C4DH59 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TRBV5-4A0A0C4DH59 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.59■■□□□ 1.05
TRBV5-4A0A0C4DH59 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRBV5-4A0A0C4DH59 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.59■■□□□ 1.05
TRBV5-4A0A0C4DH59 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.59■■□□□ 1.05
TRBV5-4A0A0C4DH59 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TRBV5-4A0A0C4DH59 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TRBV5-4A0A0C4DH59 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
TRBV5-4A0A0C4DH59 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TRBV5-4A0A0C4DH59 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
TRBV5-4A0A0C4DH59 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TRBV5-4A0A0C4DH59 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
TRBV5-4A0A0C4DH59 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TRBV5-4A0A0C4DH59 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.58■■□□□ 1.05
TRBV5-4A0A0C4DH59 AC091305.1-201ENST00000479476 895 ntBASIC21.58■■□□□ 1.05
TRBV5-4A0A0C4DH59 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21.58■■□□□ 1.05
TRBV5-4A0A0C4DH59 OXCT2P1-201ENST00000447263 1535 ntBASIC21.58■■□□□ 1.04
TRBV5-4A0A0C4DH59 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
TRBV5-4A0A0C4DH59 RASA4CP-201ENST00000424092 1398 ntBASIC21.58■■□□□ 1.04
TRBV5-4A0A0C4DH59 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
TRBV5-4A0A0C4DH59 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
TRBV5-4A0A0C4DH59 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRBV5-4A0A0C4DH59 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRBV5-4A0A0C4DH59 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRBV5-4A0A0C4DH59 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRBV5-4A0A0C4DH59 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
TRBV5-4A0A0C4DH59 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRBV5-4A0A0C4DH59 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TRBV5-4A0A0C4DH59 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRBV5-4A0A0C4DH59 MIR638-201ENST00000385237 100 ntBASIC21.57■■□□□ 1.04
TRBV5-4A0A0C4DH59 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TRBV5-4A0A0C4DH59 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
TRBV5-4A0A0C4DH59 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.57■■□□□ 1.04
TRBV5-4A0A0C4DH59 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.57■■□□□ 1.04
TRBV5-4A0A0C4DH59 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRBV5-4A0A0C4DH59 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRBV5-4A0A0C4DH59 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.57■■□□□ 1.04
TRBV5-4A0A0C4DH59 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.57■■□□□ 1.04
TRBV5-4A0A0C4DH59 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRBV5-4A0A0C4DH59 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.57■■□□□ 1.04
TRBV5-4A0A0C4DH59 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRBV5-4A0A0C4DH59 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.56■■□□□ 1.04
TRBV5-4A0A0C4DH59 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.56■■□□□ 1.04
TRBV5-4A0A0C4DH59 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRBV5-4A0A0C4DH59 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRBV5-4A0A0C4DH59 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
TRBV5-4A0A0C4DH59 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.56■■□□□ 1.04
TRBV5-4A0A0C4DH59 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRBV5-4A0A0C4DH59 IGHV3-19-201ENST00000521488 291 ntBASIC21.56■■□□□ 1.04
TRBV5-4A0A0C4DH59 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.56■■□□□ 1.04
TRBV5-4A0A0C4DH59 AC126544.1-201ENST00000580842 1059 ntBASIC21.56■■□□□ 1.04
TRBV5-4A0A0C4DH59 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.56■■□□□ 1.04
TRBV5-4A0A0C4DH59 AC005837.3-201ENST00000612163 286 ntBASIC21.56■■□□□ 1.04
TRBV5-4A0A0C4DH59 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRBV5-4A0A0C4DH59 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.56■■□□□ 1.04
TRBV5-4A0A0C4DH59 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRBV5-4A0A0C4DH59 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
TRBV5-4A0A0C4DH59 LINC00526-201ENST00000581067 1875 ntBASIC21.56■■□□□ 1.04
TRBV5-4A0A0C4DH59 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TRBV5-4A0A0C4DH59 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.55■■□□□ 1.04
TRBV5-4A0A0C4DH59 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
TRBV5-4A0A0C4DH59 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRBV5-4A0A0C4DH59 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.55■■□□□ 1.04
TRBV5-4A0A0C4DH59 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TRBV5-4A0A0C4DH59 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.55■■□□□ 1.04
TRBV5-4A0A0C4DH59 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.55■■□□□ 1.04
TRBV5-4A0A0C4DH59 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRBV5-4A0A0C4DH59 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms