Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
TRAV21A0A0B4J279 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
TRAV21A0A0B4J279 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV21A0A0B4J279 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV21A0A0B4J279 FBXW4P1-201ENST00000426721 2239 ntBASIC16.21■□□□□ 0.19
TRAV21A0A0B4J279 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
TRAV21A0A0B4J279 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
TRAV21A0A0B4J279 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC16.21■□□□□ 0.19
TRAV21A0A0B4J279 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV21A0A0B4J279 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC16.21■□□□□ 0.19
TRAV21A0A0B4J279 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV21A0A0B4J279 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV21A0A0B4J279 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV21A0A0B4J279 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRAV21A0A0B4J279 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
TRAV21A0A0B4J279 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRAV21A0A0B4J279 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
TRAV21A0A0B4J279 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRAV21A0A0B4J279 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV21A0A0B4J279 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV21A0A0B4J279 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV21A0A0B4J279 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
TRAV21A0A0B4J279 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
TRAV21A0A0B4J279 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
TRAV21A0A0B4J279 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV21A0A0B4J279 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV21A0A0B4J279 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV21A0A0B4J279 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC16.2■□□□□ 0.18
TRAV21A0A0B4J279 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC16.2■□□□□ 0.18
TRAV21A0A0B4J279 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC16.2■□□□□ 0.18
TRAV21A0A0B4J279 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC16.2■□□□□ 0.18
TRAV21A0A0B4J279 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
TRAV21A0A0B4J279 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC16.2■□□□□ 0.18
TRAV21A0A0B4J279 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV21A0A0B4J279 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV21A0A0B4J279 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV21A0A0B4J279 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC16.19■□□□□ 0.18
TRAV21A0A0B4J279 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC16.19■□□□□ 0.18
TRAV21A0A0B4J279 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
TRAV21A0A0B4J279 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC16.19■□□□□ 0.18
TRAV21A0A0B4J279 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV21A0A0B4J279 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV21A0A0B4J279 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC16.19■□□□□ 0.18
TRAV21A0A0B4J279 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV21A0A0B4J279 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV21A0A0B4J279 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC16.19■□□□□ 0.18
TRAV21A0A0B4J279 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV21A0A0B4J279 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV21A0A0B4J279 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV21A0A0B4J279 AC007375.3-201ENST00000600936 2314 ntBASIC16.19■□□□□ 0.18
TRAV21A0A0B4J279 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV21A0A0B4J279 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
TRAV21A0A0B4J279 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV21A0A0B4J279 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
TRAV21A0A0B4J279 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC16.19■□□□□ 0.18
TRAV21A0A0B4J279 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV21A0A0B4J279 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV21A0A0B4J279 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV21A0A0B4J279 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV21A0A0B4J279 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TRAV21A0A0B4J279 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV21A0A0B4J279 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
TRAV21A0A0B4J279 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC16.18■□□□□ 0.18
TRAV21A0A0B4J279 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV21A0A0B4J279 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV21A0A0B4J279 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC16.18■□□□□ 0.18
TRAV21A0A0B4J279 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV21A0A0B4J279 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC16.18■□□□□ 0.18
TRAV21A0A0B4J279 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV21A0A0B4J279 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV21A0A0B4J279 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
TRAV21A0A0B4J279 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
TRAV21A0A0B4J279 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV21A0A0B4J279 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV21A0A0B4J279 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
TRAV21A0A0B4J279 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV21A0A0B4J279 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV21A0A0B4J279 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV21A0A0B4J279 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC16.17■□□□□ 0.18
TRAV21A0A0B4J279 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
TRAV21A0A0B4J279 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV21A0A0B4J279 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
TRAV21A0A0B4J279 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC16.17■□□□□ 0.18
TRAV21A0A0B4J279 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TRAV21A0A0B4J279 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC16.17■□□□□ 0.18
TRAV21A0A0B4J279 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV21A0A0B4J279 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC16.17■□□□□ 0.18
TRAV21A0A0B4J279 KRT125P-201ENST00000546827 989 ntBASIC16.17■□□□□ 0.18
TRAV21A0A0B4J279 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV21A0A0B4J279 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC16.17■□□□□ 0.18
TRAV21A0A0B4J279 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV21A0A0B4J279 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV21A0A0B4J279 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV21A0A0B4J279 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC16.17■□□□□ 0.18
TRAV21A0A0B4J279 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TRAV21A0A0B4J279 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC16.16■□□□□ 0.18
TRAV21A0A0B4J279 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC16.16■□□□□ 0.18
TRAV21A0A0B4J279 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV21A0A0B4J279 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV21A0A0B4J279 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms