Protein–RNA interactions for Protein: A0A0B4J263

TRAV39, T-cell receptor alpha variable 39 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39A0A0B4J263 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.27■□□□□ 0.51
TRAV39A0A0B4J263 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV39A0A0B4J263 AC092053.2-201ENST00000640557 1818 ntBASIC18.26■□□□□ 0.51
TRAV39A0A0B4J263 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.26■□□□□ 0.51
TRAV39A0A0B4J263 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV39A0A0B4J263 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV39A0A0B4J263 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC18.26■□□□□ 0.51
TRAV39A0A0B4J263 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV39A0A0B4J263 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC18.26■□□□□ 0.51
TRAV39A0A0B4J263 AC099791.2-201ENST00000605725 427 ntBASIC18.26■□□□□ 0.51
TRAV39A0A0B4J263 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.26■□□□□ 0.51
TRAV39A0A0B4J263 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV39A0A0B4J263 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV39A0A0B4J263 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TRAV39A0A0B4J263 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.26■□□□□ 0.51
TRAV39A0A0B4J263 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV39A0A0B4J263 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
TRAV39A0A0B4J263 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV39A0A0B4J263 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.26■□□□□ 0.51
TRAV39A0A0B4J263 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.25■□□□□ 0.51
TRAV39A0A0B4J263 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV39A0A0B4J263 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV39A0A0B4J263 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV39A0A0B4J263 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
TRAV39A0A0B4J263 AL356441.2-201ENST00000443009 864 ntBASIC18.25■□□□□ 0.51
TRAV39A0A0B4J263 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC18.25■□□□□ 0.51
TRAV39A0A0B4J263 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV39A0A0B4J263 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC18.25■□□□□ 0.51
TRAV39A0A0B4J263 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
TRAV39A0A0B4J263 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC18.25■□□□□ 0.51
TRAV39A0A0B4J263 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.25■□□□□ 0.51
TRAV39A0A0B4J263 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV39A0A0B4J263 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV39A0A0B4J263 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV39A0A0B4J263 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.25■□□□□ 0.51
TRAV39A0A0B4J263 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.24■□□□□ 0.51
TRAV39A0A0B4J263 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV39A0A0B4J263 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV39A0A0B4J263 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.24■□□□□ 0.51
TRAV39A0A0B4J263 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV39A0A0B4J263 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV39A0A0B4J263 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV39A0A0B4J263 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC18.24■□□□□ 0.51
TRAV39A0A0B4J263 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.24■□□□□ 0.51
TRAV39A0A0B4J263 MIR3621-201ENST00000580529 85 ntBASIC18.24■□□□□ 0.51
TRAV39A0A0B4J263 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
TRAV39A0A0B4J263 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
TRAV39A0A0B4J263 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV39A0A0B4J263 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV39A0A0B4J263 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV39A0A0B4J263 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV39A0A0B4J263 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV39A0A0B4J263 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV39A0A0B4J263 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV39A0A0B4J263 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.23■□□□□ 0.51
TRAV39A0A0B4J263 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
TRAV39A0A0B4J263 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV39A0A0B4J263 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV39A0A0B4J263 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV39A0A0B4J263 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.23■□□□□ 0.51
TRAV39A0A0B4J263 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV39A0A0B4J263 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV39A0A0B4J263 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV39A0A0B4J263 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV39A0A0B4J263 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.23■□□□□ 0.51
TRAV39A0A0B4J263 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
TRAV39A0A0B4J263 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
TRAV39A0A0B4J263 C11orf96-202ENST00000528572 1834 ntBASIC18.23■□□□□ 0.51
TRAV39A0A0B4J263 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.23■□□□□ 0.51
TRAV39A0A0B4J263 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV39A0A0B4J263 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.22■□□□□ 0.51
TRAV39A0A0B4J263 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.22■□□□□ 0.51
TRAV39A0A0B4J263 AC137767.1-201ENST00000602918 1920 ntBASIC18.22■□□□□ 0.51
TRAV39A0A0B4J263 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV39A0A0B4J263 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC18.22■□□□□ 0.51
TRAV39A0A0B4J263 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV39A0A0B4J263 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV39A0A0B4J263 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV39A0A0B4J263 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV39A0A0B4J263 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.22■□□□□ 0.51
TRAV39A0A0B4J263 AL499627.2-201ENST00000606283 725 ntBASIC18.22■□□□□ 0.51
TRAV39A0A0B4J263 pRNA.6-201ENST00000610482 90 ntBASIC18.22■□□□□ 0.51
TRAV39A0A0B4J263 pRNA.5-201ENST00000612139 90 ntBASIC18.22■□□□□ 0.51
TRAV39A0A0B4J263 pRNA.11-201ENST00000618423 90 ntBASIC18.22■□□□□ 0.51
TRAV39A0A0B4J263 pRNA.13-201ENST00000619112 90 ntBASIC18.22■□□□□ 0.51
TRAV39A0A0B4J263 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV39A0A0B4J263 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
TRAV39A0A0B4J263 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV39A0A0B4J263 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV39A0A0B4J263 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TRAV39A0A0B4J263 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV39A0A0B4J263 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.21■□□□□ 0.51
TRAV39A0A0B4J263 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
TRAV39A0A0B4J263 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV39A0A0B4J263 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC18.21■□□□□ 0.51
TRAV39A0A0B4J263 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV39A0A0B4J263 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
TRAV39A0A0B4J263 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV39A0A0B4J263 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV39A0A0B4J263 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms