Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRBV6-7A0A0A0MS04 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRBV6-7A0A0A0MS04 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRBV6-7A0A0A0MS04 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.27■□□□□ 0.51
TRBV6-7A0A0A0MS04 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRBV6-7A0A0A0MS04 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
TRBV6-7A0A0A0MS04 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC18.26■□□□□ 0.51
TRBV6-7A0A0A0MS04 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TRBV6-7A0A0A0MS04 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC18.26■□□□□ 0.51
TRBV6-7A0A0A0MS04 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRBV6-7A0A0A0MS04 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRBV6-7A0A0A0MS04 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
TRBV6-7A0A0A0MS04 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRBV6-7A0A0A0MS04 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC18.26■□□□□ 0.51
TRBV6-7A0A0A0MS04 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC18.26■□□□□ 0.51
TRBV6-7A0A0A0MS04 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.26■□□□□ 0.51
TRBV6-7A0A0A0MS04 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC18.26■□□□□ 0.51
TRBV6-7A0A0A0MS04 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
TRBV6-7A0A0A0MS04 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRBV6-7A0A0A0MS04 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
TRBV6-7A0A0A0MS04 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRBV6-7A0A0A0MS04 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRBV6-7A0A0A0MS04 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
TRBV6-7A0A0A0MS04 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC18.25■□□□□ 0.51
TRBV6-7A0A0A0MS04 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRBV6-7A0A0A0MS04 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRBV6-7A0A0A0MS04 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRBV6-7A0A0A0MS04 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRBV6-7A0A0A0MS04 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
TRBV6-7A0A0A0MS04 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRBV6-7A0A0A0MS04 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRBV6-7A0A0A0MS04 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
TRBV6-7A0A0A0MS04 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
TRBV6-7A0A0A0MS04 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRBV6-7A0A0A0MS04 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRBV6-7A0A0A0MS04 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.25■□□□□ 0.51
TRBV6-7A0A0A0MS04 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
TRBV6-7A0A0A0MS04 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRBV6-7A0A0A0MS04 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRBV6-7A0A0A0MS04 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.24■□□□□ 0.51
TRBV6-7A0A0A0MS04 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC18.24■□□□□ 0.51
TRBV6-7A0A0A0MS04 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRBV6-7A0A0A0MS04 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRBV6-7A0A0A0MS04 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRBV6-7A0A0A0MS04 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRBV6-7A0A0A0MS04 FAM99A-202ENST00000538190 1989 ntBASIC18.24■□□□□ 0.51
TRBV6-7A0A0A0MS04 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
TRBV6-7A0A0A0MS04 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRBV6-7A0A0A0MS04 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRBV6-7A0A0A0MS04 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRBV6-7A0A0A0MS04 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRBV6-7A0A0A0MS04 LINC01960-201ENST00000563759 1884 ntBASIC18.23■□□□□ 0.51
TRBV6-7A0A0A0MS04 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.23■□□□□ 0.51
TRBV6-7A0A0A0MS04 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRBV6-7A0A0A0MS04 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
TRBV6-7A0A0A0MS04 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRBV6-7A0A0A0MS04 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
TRBV6-7A0A0A0MS04 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRBV6-7A0A0A0MS04 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC18.23■□□□□ 0.51
TRBV6-7A0A0A0MS04 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC18.23■□□□□ 0.51
TRBV6-7A0A0A0MS04 PRTG-204ENST00000561292 833 ntTSL 3 BASIC18.23■□□□□ 0.51
TRBV6-7A0A0A0MS04 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRBV6-7A0A0A0MS04 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC18.23■□□□□ 0.51
TRBV6-7A0A0A0MS04 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRBV6-7A0A0A0MS04 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRBV6-7A0A0A0MS04 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.23■□□□□ 0.51
TRBV6-7A0A0A0MS04 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.23■□□□□ 0.51
TRBV6-7A0A0A0MS04 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRBV6-7A0A0A0MS04 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TRBV6-7A0A0A0MS04 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRBV6-7A0A0A0MS04 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRBV6-7A0A0A0MS04 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
TRBV6-7A0A0A0MS04 AC092028.1-203ENST00000608262 953 ntBASIC18.22■□□□□ 0.51
TRBV6-7A0A0A0MS04 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRBV6-7A0A0A0MS04 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.22■□□□□ 0.51
TRBV6-7A0A0A0MS04 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRBV6-7A0A0A0MS04 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRBV6-7A0A0A0MS04 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRBV6-7A0A0A0MS04 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRBV6-7A0A0A0MS04 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRBV6-7A0A0A0MS04 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRBV6-7A0A0A0MS04 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRBV6-7A0A0A0MS04 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRBV6-7A0A0A0MS04 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
TRBV6-7A0A0A0MS04 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC18.21■□□□□ 0.51
TRBV6-7A0A0A0MS04 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRBV6-7A0A0A0MS04 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.21■□□□□ 0.51
TRBV6-7A0A0A0MS04 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.21■□□□□ 0.51
TRBV6-7A0A0A0MS04 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRBV6-7A0A0A0MS04 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.21■□□□□ 0.51
TRBV6-7A0A0A0MS04 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
TRBV6-7A0A0A0MS04 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
TRBV6-7A0A0A0MS04 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRBV6-7A0A0A0MS04 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRBV6-7A0A0A0MS04 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
TRBV6-7A0A0A0MS04 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRBV6-7A0A0A0MS04 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.2■□□□□ 0.5
TRBV6-7A0A0A0MS04 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRBV6-7A0A0A0MS04 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRBV6-7A0A0A0MS04 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms