Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC13.3□□□□□ -0.28
MTHFRP42898 MRPL27-201ENST00000225969 716 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
MTHFRP42898 PLA2G2A-201ENST00000375111 970 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
MTHFRP42898 RN7SKP102-201ENST00000411186 315 ntBASIC13.3□□□□□ -0.28
MTHFRP42898 MAS1LP1-206ENST00000419416 1047 ntBASIC13.3□□□□□ -0.28
MTHFRP42898 APOBEC3H-203ENST00000421988 592 ntTSL 5 BASIC13.3□□□□□ -0.28
MTHFRP42898 PDZD9-201ENST00000424898 1260 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
MTHFRP42898 MED15P7-201ENST00000435410 822 ntBASIC13.3□□□□□ -0.28
MTHFRP42898 RPL18P1-201ENST00000497218 552 ntBASIC13.3□□□□□ -0.28
MTHFRP42898 AC016924.1-201ENST00000511512 501 ntTSL 3 BASIC13.3□□□□□ -0.28
MTHFRP42898 DNM1P17-201ENST00000512082 426 ntBASIC13.3□□□□□ -0.28
MTHFRP42898 ALG1L14P-201ENST00000514230 434 ntBASIC13.3□□□□□ -0.28
MTHFRP42898 IGHV3-6-201ENST00000518407 347 ntBASIC13.3□□□□□ -0.28
MTHFRP42898 LINC02395-202ENST00000547443 724 ntTSL 3 BASIC13.3□□□□□ -0.28
MTHFRP42898 AC009093.2-201ENST00000563477 546 ntTSL 4 BASIC13.3□□□□□ -0.28
MTHFRP42898 AC025682.1-203ENST00000584391 442 ntTSL 2 BASIC13.3□□□□□ -0.28
MTHFRP42898 PRSS2-206ENST00000633969 852 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
MTHFRP42898 AL669831.3-208ENST00000634337 891 ntTSL 5 BASIC13.3□□□□□ -0.28
MTHFRP42898 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
MTHFRP42898 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
MTHFRP42898 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
MTHFRP42898 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
MTHFRP42898 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC13.3□□□□□ -0.28
MTHFRP42898 GOLGA2P5-201ENST00000266746 2395 ntBASIC13.3□□□□□ -0.28
MTHFRP42898 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
MTHFRP42898 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC13.3□□□□□ -0.28
MTHFRP42898 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
MTHFRP42898 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC13.3□□□□□ -0.28
MTHFRP42898 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
MTHFRP42898 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
MTHFRP42898 ARMCX6-201ENST00000361910 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
MTHFRP42898 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
MTHFRP42898 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC13.29□□□□□ -0.28
MTHFRP42898 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
MTHFRP42898 LIPG-205ENST00000580036 1453 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
MTHFRP42898 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
MTHFRP42898 ATF6B-209ENST00000375201 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
MTHFRP42898 AC020928.1-201ENST00000590750 1850 ntTSL 2 BASIC13.29□□□□□ -0.28
MTHFRP42898 MAT2B-204ENST00000518095 3409 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
MTHFRP42898 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
MTHFRP42898 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
MTHFRP42898 MMD2-203ENST00000406755 2372 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
MTHFRP42898 ARNTL-202ENST00000401424 2788 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
MTHFRP42898 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
MTHFRP42898 SERPINA1-205ENST00000404814 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
MTHFRP42898 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC13.29□□□□□ -0.28
MTHFRP42898 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
MTHFRP42898 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
MTHFRP42898 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
MTHFRP42898 TBC1D3P3-201ENST00000342824 1080 ntBASIC13.29□□□□□ -0.28
MTHFRP42898 TCTE1-201ENST00000371504 616 ntTSL 3 BASIC13.29□□□□□ -0.28
MTHFRP42898 PLP2-201ENST00000376322 620 ntTSL 2 BASIC13.29□□□□□ -0.28
MTHFRP42898 AL731577.1-201ENST00000449984 830 ntTSL 5 BASIC13.29□□□□□ -0.28
MTHFRP42898 SYS1-DBNDD2-202ENST00000452133 674 ntAPPRIS ALT2 TSL 3 BASIC13.29□□□□□ -0.28
MTHFRP42898 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC13.29□□□□□ -0.28
MTHFRP42898 RBP5-202ENST00000542370 564 ntTSL 2 BASIC13.29□□□□□ -0.28
MTHFRP42898 COPZ1-206ENST00000549043 1232 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
MTHFRP42898 NR2F2-AS1-210ENST00000561344 966 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
MTHFRP42898 KRT16P1-202ENST00000577750 679 ntTSL 3 BASIC13.29□□□□□ -0.28
MTHFRP42898 IKBKE-202ENST00000579827 678 ntTSL 2 BASIC13.29□□□□□ -0.28
MTHFRP42898 SH3GL1P2-201ENST00000582245 1082 ntBASIC13.29□□□□□ -0.28
MTHFRP42898 ZNF223-202ENST00000585552 541 ntTSL 4 BASIC13.29□□□□□ -0.28
MTHFRP42898 MIR7-3HG-204ENST00000588758 865 ntTSL 3 BASIC13.29□□□□□ -0.28
MTHFRP42898 AZU1P1-201ENST00000603479 385 ntBASIC13.29□□□□□ -0.28
MTHFRP42898 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
MTHFRP42898 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
MTHFRP42898 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC13.29□□□□□ -0.28
MTHFRP42898 MAGED2-205ENST00000375060 1798 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
MTHFRP42898 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
MTHFRP42898 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
MTHFRP42898 ZNF555-203ENST00000591539 2270 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
MTHFRP42898 ERGIC3-202ENST00000348547 1359 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
MTHFRP42898 UPF3B-204ENST00000619445 1385 ntTSL 5 BASIC13.29□□□□□ -0.28
MTHFRP42898 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
MTHFRP42898 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
MTHFRP42898 CNTF-201ENST00000361987 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
MTHFRP42898 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
MTHFRP42898 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
MTHFRP42898 SCN8A-215ENST00000638820 3359 ntTSL 5 BASIC13.29□□□□□ -0.28
MTHFRP42898 CTNNBL1-203ENST00000373473 1493 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
MTHFRP42898 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
MTHFRP42898 CDC25C-202ENST00000348983 1951 ntTSL 5 BASIC13.29□□□□□ -0.28
MTHFRP42898 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
MTHFRP42898 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
MTHFRP42898 ZSCAN21-201ENST00000292450 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
MTHFRP42898 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
MTHFRP42898 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
MTHFRP42898 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
MTHFRP42898 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
MTHFRP42898 AKTIP-201ENST00000300245 2133 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
MTHFRP42898 UBA3-201ENST00000349511 2112 ntAPPRIS ALT1 TSL 2 BASIC13.28□□□□□ -0.28
MTHFRP42898 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
MTHFRP42898 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
MTHFRP42898 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC13.28□□□□□ -0.28
MTHFRP42898 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
MTHFRP42898 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC13.28□□□□□ -0.28
MTHFRP42898 ATAT1-204ENST00000330083 1728 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
MTHFRP42898 AC067852.6-201ENST00000591237 1736 ntBASIC13.28□□□□□ -0.28
MTHFRP42898 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
MTHFRP42898 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms