Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 CBR3-AS1-207ENST00000608641 777 ntTSL 5 BASIC11.7□□□□□ -0.54
NPIPA3F8WFD2 Metazoa_SRP.47-201ENST00000616942 279 ntBASIC11.7□□□□□ -0.54
NPIPA3F8WFD2 TBC1D3F-201ENST00000620210 2117 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
NPIPA3F8WFD2 ADORA3-204ENST00000632535 1201 ntTSL 3 BASIC11.7□□□□□ -0.54
NPIPA3F8WFD2 AC245427.1-201ENST00000633705 760 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
NPIPA3F8WFD2 AC006207.1-201ENST00000637958 562 ntTSL 5 BASIC11.7□□□□□ -0.54
NPIPA3F8WFD2 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
NPIPA3F8WFD2 TRPC7-202ENST00000378459 2406 ntTSL 5 BASIC11.7□□□□□ -0.54
NPIPA3F8WFD2 LINC01209-201ENST00000451289 2400 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
NPIPA3F8WFD2 AC008806.1-201ENST00000624962 2443 ntBASIC11.7□□□□□ -0.54
NPIPA3F8WFD2 DPP8-201ENST00000300141 3139 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
NPIPA3F8WFD2 PLEKHH1-201ENST00000329153 6604 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
NPIPA3F8WFD2 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC11.7□□□□□ -0.54
NPIPA3F8WFD2 CLCN4-203ENST00000421085 6534 ntTSL 5 BASIC11.7□□□□□ -0.54
NPIPA3F8WFD2 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC11.7□□□□□ -0.54
NPIPA3F8WFD2 SP140L-203ENST00000415673 2665 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
NPIPA3F8WFD2 BX088651.4-202ENST00000428895 1479 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
NPIPA3F8WFD2 ABLIM2-206ENST00000447017 2902 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
NPIPA3F8WFD2 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
NPIPA3F8WFD2 NFE2L1-222ENST00000585291 4390 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
NPIPA3F8WFD2 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
NPIPA3F8WFD2 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC11.69□□□□□ -0.54
NPIPA3F8WFD2 ACR-201ENST00000216139 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
NPIPA3F8WFD2 ZYX-203ENST00000392910 2123 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
NPIPA3F8WFD2 SRPK3-208ENST00000489426 4479 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
NPIPA3F8WFD2 IL18BP-201ENST00000260049 1354 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
NPIPA3F8WFD2 HLF-202ENST00000430986 1385 ntTSL 2 BASIC11.69□□□□□ -0.54
NPIPA3F8WFD2 NLRP2-202ENST00000339757 3422 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
NPIPA3F8WFD2 AC008764.8-201ENST00000623966 2717 ntBASIC11.69□□□□□ -0.54
NPIPA3F8WFD2 PSMD11-201ENST00000261712 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
NPIPA3F8WFD2 GUCY1B3-207ENST00000513437 2355 ntTSL 2 BASIC11.69□□□□□ -0.54
NPIPA3F8WFD2 TRIM32-203ENST00000450136 3717 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
NPIPA3F8WFD2 EPB41L4A-201ENST00000261486 4707 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
NPIPA3F8WFD2 TBX4-202ENST00000393853 3398 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
NPIPA3F8WFD2 ATG7-213ENST00000446450 2042 ntTSL 2 BASIC11.69□□□□□ -0.54
NPIPA3F8WFD2 CTCFL-211ENST00000502686 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
NPIPA3F8WFD2 ANKRD17-202ENST00000358602 10784 ntAPPRIS P4 TSL 5 BASIC11.69□□□□□ -0.54
NPIPA3F8WFD2 BSCL2-203ENST00000360796 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
NPIPA3F8WFD2 SMCR8-201ENST00000406438 8279 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
NPIPA3F8WFD2 AC092902.2-210ENST00000468859 1996 ntTSL 2 BASIC11.69□□□□□ -0.54
NPIPA3F8WFD2 AC020915.2-201ENST00000591325 4227 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
NPIPA3F8WFD2 ELOVL1-216ENST00000621943 1625 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
NPIPA3F8WFD2 WNK1-202ENST00000340908 11208 ntTSL 5 BASIC11.69□□□□□ -0.54
NPIPA3F8WFD2 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
NPIPA3F8WFD2 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
NPIPA3F8WFD2 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
NPIPA3F8WFD2 POP5-201ENST00000341039 913 ntTSL 2 BASIC11.69□□□□□ -0.54
NPIPA3F8WFD2 MED27-202ENST00000357028 1281 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
NPIPA3F8WFD2 TMEM79-202ENST00000357501 975 ntTSL 3 BASIC11.69□□□□□ -0.54
NPIPA3F8WFD2 FTHL17-201ENST00000359202 813 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
NPIPA3F8WFD2 TPT1P9-201ENST00000413759 514 ntBASIC11.69□□□□□ -0.54
NPIPA3F8WFD2 HMGN1P4-201ENST00000419500 290 ntBASIC11.69□□□□□ -0.54
NPIPA3F8WFD2 LINC01678-202ENST00000424921 475 ntTSL 3 BASIC11.69□□□□□ -0.54
NPIPA3F8WFD2 AC079325.1-201ENST00000430386 857 ntBASIC11.69□□□□□ -0.54
NPIPA3F8WFD2 AC003958.1-201ENST00000435883 421 ntBASIC11.69□□□□□ -0.54
NPIPA3F8WFD2 PRKRIP1-202ENST00000462601 884 ntTSL 2 BASIC11.69□□□□□ -0.54
NPIPA3F8WFD2 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC11.69□□□□□ -0.54
NPIPA3F8WFD2 AC139795.1-201ENST00000499314 838 ntTSL 5 BASIC11.69□□□□□ -0.54
NPIPA3F8WFD2 AC103724.2-201ENST00000520355 476 ntBASIC11.69□□□□□ -0.54
NPIPA3F8WFD2 C1orf198-207ENST00000523410 1041 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
NPIPA3F8WFD2 MYL6-215ENST00000549566 685 ntTSL 2 BASIC11.69□□□□□ -0.54
NPIPA3F8WFD2 AC090971.1-201ENST00000559302 510 ntTSL 2 BASIC11.69□□□□□ -0.54
NPIPA3F8WFD2 CDC37P2-201ENST00000562287 1029 ntBASIC11.69□□□□□ -0.54
NPIPA3F8WFD2 SULT1A3-206ENST00000563322 906 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
NPIPA3F8WFD2 TEX38-204ENST00000564373 637 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
NPIPA3F8WFD2 CDIPT-AS1-202ENST00000565014 729 ntTSL 2 BASIC11.69□□□□□ -0.54
NPIPA3F8WFD2 SULT1A4-204ENST00000565290 906 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
NPIPA3F8WFD2 TRAPPC2L-212ENST00000567312 499 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
NPIPA3F8WFD2 MIR4539-201ENST00000579784 60 ntBASIC11.69□□□□□ -0.54
NPIPA3F8WFD2 NSRP1-213ENST00000584423 482 ntTSL 2 BASIC11.69□□□□□ -0.54
NPIPA3F8WFD2 AC009118.3-201ENST00000622896 873 ntBASIC11.69□□□□□ -0.54
NPIPA3F8WFD2 FCGR3A-208ENST00000638849 873 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
NPIPA3F8WFD2 SNX10-201ENST00000338523 2546 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
NPIPA3F8WFD2 FAM27E3-201ENST00000418795 1593 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
NPIPA3F8WFD2 LARP4-207ENST00000518561 1578 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
NPIPA3F8WFD2 SEC22C-205ENST00000417572 1513 ntTSL 3 BASIC11.69□□□□□ -0.54
NPIPA3F8WFD2 MGLL-205ENST00000453507 4552 ntTSL 2 BASIC11.69□□□□□ -0.54
NPIPA3F8WFD2 SIGLEC17P-204ENST00000618545 1517 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
NPIPA3F8WFD2 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
NPIPA3F8WFD2 WDR47-201ENST00000357672 4144 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
NPIPA3F8WFD2 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
NPIPA3F8WFD2 FGFR2-212ENST00000369060 3244 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
NPIPA3F8WFD2 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
NPIPA3F8WFD2 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC11.69□□□□□ -0.54
NPIPA3F8WFD2 AC022098.1-201ENST00000588387 2861 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
NPIPA3F8WFD2 AL031590.1-202ENST00000641466 1737 ntBASIC11.69□□□□□ -0.54
NPIPA3F8WFD2 AC027369.3-201ENST00000530465 3707 ntBASIC11.69□□□□□ -0.54
NPIPA3F8WFD2 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
NPIPA3F8WFD2 PAPLN-208ENST00000555445 4282 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
NPIPA3F8WFD2 TOP3B-202ENST00000398793 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
NPIPA3F8WFD2 CASC15-204ENST00000606197 3969 ntTSL 2 BASIC11.69□□□□□ -0.54
NPIPA3F8WFD2 AP002360.1-203ENST00000321844 5363 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
NPIPA3F8WFD2 RBM12B-201ENST00000399300 7269 ntAPPRIS P2 TSL 2 BASIC11.68□□□□□ -0.54
NPIPA3F8WFD2 RBPJ-203ENST00000345843 1682 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
NPIPA3F8WFD2 ENTPD3-203ENST00000445129 1658 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
NPIPA3F8WFD2 TMEM30A-203ENST00000475111 2791 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
NPIPA3F8WFD2 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
NPIPA3F8WFD2 AC005549.1-201ENST00000579438 1629 ntBASIC11.68□□□□□ -0.54
NPIPA3F8WFD2 FAM214B-205ENST00000488109 2999 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
NPIPA3F8WFD2 RIC8B-201ENST00000355478 3207 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms