Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 DLGAP1-212ENST00000515196 5314 ntTSL 2 BASIC11.72□□□□□ -0.53
P04436 KCNV1-202ENST00000524391 6979 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P04436 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
P04436 GJB1-202ENST00000374022 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P04436 NDEL1-203ENST00000402554 1858 ntTSL 5 BASIC11.72□□□□□ -0.53
P04436 TRPC6-201ENST00000344327 4612 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P04436 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC11.72□□□□□ -0.53
P04436 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC11.72□□□□□ -0.53
P04436 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P04436 ENTPD3-204ENST00000456402 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P04436 AL031590.1-202ENST00000641466 1737 ntBASIC11.72□□□□□ -0.53
P04436 SCNN1B-202ENST00000343070 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P04436 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
P04436 AL109615.2-201ENST00000455005 1608 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
P04436 AP000897.1-201ENST00000584036 1613 ntBASIC11.71□□□□□ -0.53
P04436 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
P04436 MRPL48-201ENST00000310614 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
P04436 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
P04436 IMMT-204ENST00000410111 3001 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
P04436 PCDHGA2-202ENST00000528330 4543 ntAPPRIS ALT2 BASIC11.71□□□□□ -0.53
P04436 AKNA-201ENST00000223791 4414 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
P04436 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
P04436 PAXIP1-AS2-203ENST00000449486 2121 ntTSL 2 BASIC11.71□□□□□ -0.53
P04436 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC11.71□□□□□ -0.53
P04436 AC138150.2-201ENST00000589796 2053 ntTSL 2 BASIC11.71□□□□□ -0.53
P04436 FAHD2A-204ENST00000447036 1366 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
P04436 GTF2F1-201ENST00000394456 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
P04436 HNF1A-208ENST00000541395 3332 ntTSL 2 BASIC11.71□□□□□ -0.53
P04436 FOLR1-203ENST00000393679 1331 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
P04436 CD9-212ENST00000610354 1315 ntTSL 5 BASIC11.71□□□□□ -0.53
P04436 RNASE8-201ENST00000308227 634 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
P04436 SPATS1-202ENST00000323108 1107 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
P04436 AP000487.2-201ENST00000324630 394 ntTSL 3 BASIC11.71□□□□□ -0.53
P04436 LYG2-201ENST00000333017 862 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
P04436 NANOS3-201ENST00000339133 581 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
P04436 FTHL17-201ENST00000359202 813 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
P04436 CRYBB2-201ENST00000398215 886 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
P04436 GSG1L2-201ENST00000399363 882 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
P04436 AL121994.1-201ENST00000413189 402 ntBASIC11.71□□□□□ -0.53
P04436 SNRPCP15-201ENST00000424055 192 ntBASIC11.71□□□□□ -0.53
P04436 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC11.71□□□□□ -0.53
P04436 RPL13AP5-201ENST00000439189 612 ntBASIC11.71□□□□□ -0.53
P04436 AC131235.2-201ENST00000445553 1057 ntBASIC11.71□□□□□ -0.53
P04436 AC008676.2-201ENST00000519499 741 ntTSL 3 BASIC11.71□□□□□ -0.53
P04436 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC11.71□□□□□ -0.53
P04436 AP003040.1-201ENST00000532044 1024 ntBASIC11.71□□□□□ -0.53
P04436 AP000439.2-201ENST00000542064 726 ntTSL 2 BASIC11.71□□□□□ -0.53
P04436 CSRP2-207ENST00000552330 910 ntTSL 3 BASIC11.71□□□□□ -0.53
P04436 RN7SL440P-201ENST00000577855 343 ntBASIC11.71□□□□□ -0.53
P04436 AC004231.3-201ENST00000579136 258 ntTSL 3 BASIC11.71□□□□□ -0.53
P04436 KRT16P4-202ENST00000580052 362 ntTSL 3 BASIC11.71□□□□□ -0.53
P04436 Z93930.2-203ENST00000585003 516 ntBASIC11.71□□□□□ -0.53
P04436 AC108102.1-201ENST00000606528 548 ntTSL 3 BASIC11.71□□□□□ -0.53
P04436 FP671120.4-201ENST00000629969 923 ntBASIC11.71□□□□□ -0.53
P04436 AC008993.3-201ENST00000633603 631 ntTSL 5 BASIC11.71□□□□□ -0.53
P04436 AC016526.4-201ENST00000636059 517 ntTSL 3 BASIC11.71□□□□□ -0.53
P04436 AC138627.1-201ENST00000641127 1257 ntBASIC11.71□□□□□ -0.53
P04436 LINC00656-201ENST00000443744 1896 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
P04436 MCL1-204ENST00000620947 3626 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
P04436 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
P04436 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
P04436 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
P04436 MRPL44-201ENST00000258383 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
P04436 ASPH-208ENST00000517856 6337 ntTSL 2 BASIC11.71□□□□□ -0.54
P04436 BMP4-205ENST00000558984 1705 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
P04436 AC022098.1-201ENST00000588387 2861 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
P04436 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
P04436 DENND4C-205ENST00000434457 6718 ntTSL 5 BASIC11.71□□□□□ -0.54
P04436 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
P04436 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
P04436 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
P04436 TBC1D3F-201ENST00000620210 2117 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
P04436 WDR47-204ENST00000369965 4240 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
P04436 STXBP5L-201ENST00000273666 9496 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
P04436 MKNK1-201ENST00000341183 2612 ntTSL 5 BASIC11.71□□□□□ -0.54
P04436 OSER1-AS1-202ENST00000437730 1563 ntTSL 5 BASIC11.71□□□□□ -0.54
P04436 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC11.71□□□□□ -0.54
P04436 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC11.71□□□□□ -0.54
P04436 VWA3B-221ENST00000614454 1542 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
P04436 TSGA10-201ENST00000355053 3037 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
P04436 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
P04436 C1QTNF6-201ENST00000337843 2934 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P04436 PIWIL1-201ENST00000245255 3897 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P04436 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
P04436 GGPS1-203ENST00000391855 1407 ntTSL 2 BASIC11.7□□□□□ -0.54
P04436 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC11.7□□□□□ -0.54
P04436 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
P04436 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
P04436 AC106872.9-201ENST00000512437 1393 ntBASIC11.7□□□□□ -0.54
P04436 ZWILCH-209ENST00000565627 1845 ntTSL 2 BASIC11.7□□□□□ -0.54
P04436 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC11.7□□□□□ -0.54
P04436 ZNF726-204ENST00000531821 1798 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
P04436 CPA1-207ENST00000484324 1303 ntTSL 5 BASIC11.7□□□□□ -0.54
P04436 NTRK3-204ENST00000360948 3004 ntTSL 5 BASIC11.7□□□□□ -0.54
P04436 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
P04436 EDF1-201ENST00000224073 640 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P04436 TIMM10-201ENST00000257245 680 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P04436 COX4I2-201ENST00000376075 693 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P04436 KRTAP10-10-201ENST00000380095 1100 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
P04436 CD79B-203ENST00000392795 1254 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms