Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 RABL2B-201ENST00000354869 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SLC1A1P43005 LILRP2-202ENST00000413572 1383 ntBASIC13.45□□□□□ -0.26
SLC1A1P43005 ZNF473-205ENST00000595661 4828 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
SLC1A1P43005 INTS8-217ENST00000523731 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SLC1A1P43005 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
SLC1A1P43005 POU5F2-201ENST00000606183 8418 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
SLC1A1P43005 HYPK-201ENST00000406925 4777 ntAPPRIS P2 TSL 2 BASIC13.44□□□□□ -0.26
SLC1A1P43005 CAMTA2-204ENST00000414043 4589 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SLC1A1P43005 AC068669.1-201ENST00000623793 2228 ntBASIC13.44□□□□□ -0.26
SLC1A1P43005 AMACR-201ENST00000335606 4153 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SLC1A1P43005 ZNF749-201ENST00000334181 2587 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
SLC1A1P43005 KRT78-202ENST00000359499 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
SLC1A1P43005 LIN54-201ENST00000340417 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SLC1A1P43005 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SLC1A1P43005 AC084855.2-201ENST00000559400 2393 ntTSL 2 BASIC13.44□□□□□ -0.26
SLC1A1P43005 ELN-201ENST00000252034 3781 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
SLC1A1P43005 MID1IP1-204ENST00000614558 3781 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
SLC1A1P43005 GRIK1-206ENST00000399913 3234 ntTSL 2 BASIC13.44□□□□□ -0.26
SLC1A1P43005 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
SLC1A1P43005 KCNAB1-215ENST00000618897 4437 ntTSL 5 BASIC13.44□□□□□ -0.26
SLC1A1P43005 SCAF8-203ENST00000417268 4944 ntTSL 2 BASIC13.44□□□□□ -0.26
SLC1A1P43005 RAD1-203ENST00000382038 5770 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SLC1A1P43005 RASAL2-201ENST00000367649 4378 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
SLC1A1P43005 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC13.44□□□□□ -0.26
SLC1A1P43005 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SLC1A1P43005 L1CAM-202ENST00000361981 5004 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SLC1A1P43005 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
SLC1A1P43005 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SLC1A1P43005 C10orf90-202ENST00000356858 2995 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
SLC1A1P43005 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
SLC1A1P43005 AC083873.1-201ENST00000421179 1099 ntBASIC13.44□□□□□ -0.26
SLC1A1P43005 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SLC1A1P43005 CTCFL-204ENST00000422869 2966 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SLC1A1P43005 AL512599.1-201ENST00000430724 685 ntBASIC13.44□□□□□ -0.26
SLC1A1P43005 AL158847.1-201ENST00000431955 808 ntTSL 3 BASIC13.44□□□□□ -0.26
SLC1A1P43005 ZNF877P-201ENST00000437614 612 ntBASIC13.44□□□□□ -0.26
SLC1A1P43005 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC13.44□□□□□ -0.26
SLC1A1P43005 AC009312.1-201ENST00000457110 592 ntTSL 4 BASIC13.44□□□□□ -0.26
SLC1A1P43005 PRKRIP1-202ENST00000462601 884 ntTSL 2 BASIC13.44□□□□□ -0.26
SLC1A1P43005 RN7SL582P-201ENST00000491078 279 ntBASIC13.44□□□□□ -0.26
SLC1A1P43005 HNRNPA1P4-201ENST00000509706 756 ntBASIC13.44□□□□□ -0.26
SLC1A1P43005 USB1-205ENST00000561743 1135 ntTSL 3 BASIC13.44□□□□□ -0.26
SLC1A1P43005 TMED1-204ENST00000588289 541 ntTSL 2 BASIC13.44□□□□□ -0.26
SLC1A1P43005 AC007450.4-201ENST00000614709 524 ntBASIC13.44□□□□□ -0.26
SLC1A1P43005 CD27-AS1-209ENST00000545339 1766 ntTSL 5 BASIC13.44□□□□□ -0.26
SLC1A1P43005 AIPL1-201ENST00000250087 2783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
SLC1A1P43005 AC010969.1-201ENST00000340444 2412 ntTSL 2 BASIC13.44□□□□□ -0.26
SLC1A1P43005 OR13A1-203ENST00000553795 2078 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
SLC1A1P43005 AC026725.1-201ENST00000511327 1588 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SLC1A1P43005 DNAJB12-204ENST00000461919 2369 ntTSL 2 BASIC13.44□□□□□ -0.26
SLC1A1P43005 ARRDC3-AS1-201ENST00000625713 2500 ntTSL 2 BASIC13.44□□□□□ -0.26
SLC1A1P43005 SLC25A30-207ENST00000539591 3608 ntTSL 2 BASIC13.44□□□□□ -0.26
SLC1A1P43005 MYF5-201ENST00000228644 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SLC1A1P43005 ATP2A3-203ENST00000359983 3290 ntTSL 5 BASIC13.44□□□□□ -0.26
SLC1A1P43005 FAM198B-207ENST00000592057 3425 ntTSL 2 BASIC13.44□□□□□ -0.26
SLC1A1P43005 DGKA-202ENST00000394147 2770 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
SLC1A1P43005 AL590428.1-201ENST00000428865 1973 ntTSL 2 BASIC13.43□□□□□ -0.26
SLC1A1P43005 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SLC1A1P43005 AL109615.2-201ENST00000455005 1608 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SLC1A1P43005 INF2-202ENST00000330634 7578 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
SLC1A1P43005 PLAT-202ENST00000352041 2516 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SLC1A1P43005 ZBTB20-211ENST00000471418 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SLC1A1P43005 GZMB-201ENST00000216341 968 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SLC1A1P43005 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SLC1A1P43005 SIRPB3P-201ENST00000340424 1216 ntBASIC13.43□□□□□ -0.26
SLC1A1P43005 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
SLC1A1P43005 RXRG-201ENST00000359842 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SLC1A1P43005 PRPF4-202ENST00000374199 3212 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SLC1A1P43005 PARK7-204ENST00000377493 795 ntTSL 2 BASIC13.43□□□□□ -0.26
SLC1A1P43005 KRT8P30-201ENST00000432100 650 ntBASIC13.43□□□□□ -0.26
SLC1A1P43005 FAM160A1-201ENST00000435205 4576 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
SLC1A1P43005 AC004951.1-201ENST00000447643 1866 ntTSL 2 BASIC13.43□□□□□ -0.26
SLC1A1P43005 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC13.43□□□□□ -0.26
SLC1A1P43005 AC023162.1-201ENST00000505608 474 ntBASIC13.43□□□□□ -0.26
SLC1A1P43005 IGHVII-74-1-201ENST00000517572 241 ntBASIC13.43□□□□□ -0.26
SLC1A1P43005 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC13.43□□□□□ -0.26
SLC1A1P43005 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC13.43□□□□□ -0.26
SLC1A1P43005 F11R-204ENST00000537746 1245 ntTSL 2 BASIC13.43□□□□□ -0.26
SLC1A1P43005 AC025259.1-201ENST00000550301 647 ntTSL 3 BASIC13.43□□□□□ -0.26
SLC1A1P43005 IFI27L1-209ENST00000555523 680 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
SLC1A1P43005 ANGEL1-205ENST00000557179 1427 ntTSL 2 BASIC13.43□□□□□ -0.26
SLC1A1P43005 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC13.43□□□□□ -0.26
SLC1A1P43005 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
SLC1A1P43005 GOSR2-209ENST00000575949 1444 ntTSL 2 BASIC13.43□□□□□ -0.26
SLC1A1P43005 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC13.43□□□□□ -0.26
SLC1A1P43005 FXYD3-212ENST00000605550 590 ntTSL 4 BASIC13.43□□□□□ -0.26
SLC1A1P43005 AC242988.1-201ENST00000611044 714 ntTSL 3 BASIC13.43□□□□□ -0.26
SLC1A1P43005 ILF3-201ENST00000250241 3035 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SLC1A1P43005 HCG18-236ENST00000438412 2440 ntTSL 2 BASIC13.43□□□□□ -0.26
SLC1A1P43005 OAS1-208ENST00000551241 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
SLC1A1P43005 CACNA1F-203ENST00000376265 6070 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SLC1A1P43005 TMEM100-205ENST00000575734 1962 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
SLC1A1P43005 CST3-203ENST00000398411 3286 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SLC1A1P43005 ECHDC1-209ENST00000454591 1515 ntTSL 2 BASIC13.43□□□□□ -0.26
SLC1A1P43005 PRICKLE1-216ENST00000640132 4278 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
SLC1A1P43005 NKAP-201ENST00000371410 5963 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SLC1A1P43005 PPP1R10-201ENST00000376511 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SLC1A1P43005 AC245100.6-201ENST00000427169 1918 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SLC1A1P43005 OLFML3-201ENST00000320334 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SLC1A1P43005 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms