Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 ASPDH-201ENST00000376916 848 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPA3F8WFD2 PAX5-203ENST00000377847 996 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPA3F8WFD2 FUNDC1-201ENST00000378045 1196 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPA3F8WFD2 AC064853.1-201ENST00000413096 540 ntTSL 4 BASIC11.79□□□□□ -0.52
NPIPA3F8WFD2 SNRPCP15-201ENST00000424055 192 ntBASIC11.79□□□□□ -0.52
NPIPA3F8WFD2 GHRL-206ENST00000430179 856 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPA3F8WFD2 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC11.79□□□□□ -0.52
NPIPA3F8WFD2 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC11.79□□□□□ -0.52
NPIPA3F8WFD2 CSHL1-206ENST00000450719 973 ntTSL 2 BASIC11.79□□□□□ -0.52
NPIPA3F8WFD2 AC104117.1-201ENST00000517817 900 ntBASIC11.79□□□□□ -0.52
NPIPA3F8WFD2 IGHEP1-201ENST00000521393 651 ntBASIC11.79□□□□□ -0.52
NPIPA3F8WFD2 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC11.79□□□□□ -0.52
NPIPA3F8WFD2 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC11.79□□□□□ -0.52
NPIPA3F8WFD2 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC11.79□□□□□ -0.52
NPIPA3F8WFD2 ABCC6P1-203ENST00000565566 1170 ntBASIC11.79□□□□□ -0.52
NPIPA3F8WFD2 CLPP-205ENST00000596605 646 ntTSL 2 BASIC11.79□□□□□ -0.52
NPIPA3F8WFD2 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
NPIPA3F8WFD2 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC11.79□□□□□ -0.52
NPIPA3F8WFD2 CICP20-201ENST00000443330 2801 ntBASIC11.79□□□□□ -0.52
NPIPA3F8WFD2 PEX5-201ENST00000266563 3252 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPA3F8WFD2 MRPS16-202ENST00000372945 2634 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPA3F8WFD2 ZNF706-209ENST00000520347 3502 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
NPIPA3F8WFD2 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPA3F8WFD2 FAM238C-202ENST00000639963 1787 ntTSL 2 BASIC11.79□□□□□ -0.52
NPIPA3F8WFD2 TMED7-201ENST00000456936 3757 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPA3F8WFD2 FAM225B-201ENST00000423546 5629 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPA3F8WFD2 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPA3F8WFD2 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPA3F8WFD2 ASMT-203ENST00000381241 1388 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPA3F8WFD2 TRMT10B-203ENST00000377754 1881 ntTSL 2 BASIC11.78□□□□□ -0.52
NPIPA3F8WFD2 MYO1D-206ENST00000579584 3500 ntTSL 2 BASIC11.78□□□□□ -0.52
NPIPA3F8WFD2 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
NPIPA3F8WFD2 TMEM186-201ENST00000333050 1448 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NPIPA3F8WFD2 ITGAL-203ENST00000433423 1416 ntTSL 2 BASIC11.78□□□□□ -0.52
NPIPA3F8WFD2 EPB42-202ENST00000441366 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NPIPA3F8WFD2 FAM53B-203ENST00000392754 3557 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
NPIPA3F8WFD2 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NPIPA3F8WFD2 KIAA1958-202ENST00000374244 2643 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
NPIPA3F8WFD2 ARL8B-202ENST00000419534 1684 ntTSL 2 BASIC11.78□□□□□ -0.52
NPIPA3F8WFD2 TRIM39-RPP21-201ENST00000623385 1698 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
NPIPA3F8WFD2 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
NPIPA3F8WFD2 RORC-201ENST00000318247 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
NPIPA3F8WFD2 ZNF771-204ENST00000566625 2415 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
NPIPA3F8WFD2 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
NPIPA3F8WFD2 MCFD2-212ENST00000444761 4169 ntTSL 2 BASIC11.78□□□□□ -0.52
NPIPA3F8WFD2 WDR6-201ENST00000395474 4401 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
NPIPA3F8WFD2 AC024560.1-201ENST00000424493 1471 ntTSL 3 BASIC11.78□□□□□ -0.52
NPIPA3F8WFD2 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NPIPA3F8WFD2 KCNH4-202ENST00000607371 3723 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
NPIPA3F8WFD2 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC11.78□□□□□ -0.52
NPIPA3F8WFD2 MYL7-201ENST00000223364 612 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NPIPA3F8WFD2 SPATS1-202ENST00000323108 1107 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
NPIPA3F8WFD2 LYPLA2-203ENST00000374503 868 ntTSL 2 BASIC11.78□□□□□ -0.52
NPIPA3F8WFD2 TRBV20OR9-2-201ENST00000379435 416 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
NPIPA3F8WFD2 AL121949.3-201ENST00000406684 385 ntBASIC11.78□□□□□ -0.52
NPIPA3F8WFD2 NOS2P3-201ENST00000411468 867 ntBASIC11.78□□□□□ -0.52
NPIPA3F8WFD2 NOS2P2-201ENST00000426269 867 ntBASIC11.78□□□□□ -0.52
NPIPA3F8WFD2 ASLP1-201ENST00000428790 637 ntBASIC11.78□□□□□ -0.52
NPIPA3F8WFD2 PLA2G6-210ENST00000435484 612 ntTSL 4 BASIC11.78□□□□□ -0.52
NPIPA3F8WFD2 AP000343.1-201ENST00000440602 385 ntBASIC11.78□□□□□ -0.52
NPIPA3F8WFD2 AL121894.1-201ENST00000450971 436 ntTSL 2 BASIC11.78□□□□□ -0.52
NPIPA3F8WFD2 DMKN-244ENST00000480502 820 ntAPPRIS ALT2 TSL 3 BASIC11.78□□□□□ -0.52
NPIPA3F8WFD2 AL121790.2-202ENST00000556024 363 ntTSL 5 BASIC11.78□□□□□ -0.52
NPIPA3F8WFD2 SPAG5-AS1-204ENST00000556050 871 ntTSL 2 BASIC11.78□□□□□ -0.52
NPIPA3F8WFD2 AC104590.1-201ENST00000560813 648 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
NPIPA3F8WFD2 AC004231.3-201ENST00000579136 258 ntTSL 3 BASIC11.78□□□□□ -0.52
NPIPA3F8WFD2 RPSAP67-201ENST00000584105 862 ntBASIC11.78□□□□□ -0.52
NPIPA3F8WFD2 PTPN20CP-201ENST00000614090 920 ntBASIC11.78□□□□□ -0.52
NPIPA3F8WFD2 C1QTNF3-202ENST00000382065 2802 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NPIPA3F8WFD2 ANKRA2-201ENST00000296785 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NPIPA3F8WFD2 ENPP4-201ENST00000321037 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NPIPA3F8WFD2 C4orf33-201ENST00000281146 6170 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NPIPA3F8WFD2 STPG4-201ENST00000294947 1621 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
NPIPA3F8WFD2 IL10-202ENST00000423557 1630 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NPIPA3F8WFD2 ZBED9-201ENST00000452236 4877 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NPIPA3F8WFD2 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
NPIPA3F8WFD2 NDRG1-222ENST00000522476 1385 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
NPIPA3F8WFD2 CCT8-211ENST00000540844 1927 ntTSL 2 BASIC11.78□□□□□ -0.52
NPIPA3F8WFD2 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NPIPA3F8WFD2 ZNF124-202ENST00000472531 2243 ntTSL 2 BASIC11.78□□□□□ -0.52
NPIPA3F8WFD2 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NPIPA3F8WFD2 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC11.78□□□□□ -0.52
NPIPA3F8WFD2 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
NPIPA3F8WFD2 CDC6-201ENST00000209728 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
NPIPA3F8WFD2 PCF11-201ENST00000298281 7677 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
NPIPA3F8WFD2 CDK7-201ENST00000256443 1439 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
NPIPA3F8WFD2 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
NPIPA3F8WFD2 ZNF793-205ENST00000587143 1488 ntAPPRIS P1 TSL 4 BASIC11.77□□□□□ -0.52
NPIPA3F8WFD2 LINC01801-202ENST00000590963 2077 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
NPIPA3F8WFD2 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC11.77□□□□□ -0.52
NPIPA3F8WFD2 FAM237B-201ENST00000637645 3877 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
NPIPA3F8WFD2 KCNMA1-241ENST00000638606 3852 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
NPIPA3F8WFD2 KCNMA1-279ENST00000640182 3852 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
NPIPA3F8WFD2 KDM6A-201ENST00000377967 5438 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
NPIPA3F8WFD2 BTBD3-204ENST00000405977 5137 ntAPPRIS P4 TSL 5 BASIC11.77□□□□□ -0.52
NPIPA3F8WFD2 ACTN2-201ENST00000366578 4863 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
NPIPA3F8WFD2 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC11.77□□□□□ -0.53
NPIPA3F8WFD2 NUDT9-203ENST00000473942 2458 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
NPIPA3F8WFD2 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
NPIPA3F8WFD2 LIPC-202ENST00000356113 2161 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms