Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AC131212.1-201ENST00000613771 668 ntBASIC16.42■□□□□ 0.22
HLA-DRB4X5D2U9 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC16.42■□□□□ 0.22
HLA-DRB4X5D2U9 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DRB4X5D2U9 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DRB4X5D2U9 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DRB4X5D2U9 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DRB4X5D2U9 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC16.42■□□□□ 0.22
HLA-DRB4X5D2U9 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DRB4X5D2U9 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC16.42■□□□□ 0.22
HLA-DRB4X5D2U9 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
HLA-DRB4X5D2U9 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
HLA-DRB4X5D2U9 LINC00526-201ENST00000581067 1875 ntBASIC16.42■□□□□ 0.22
HLA-DRB4X5D2U9 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
HLA-DRB4X5D2U9 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
HLA-DRB4X5D2U9 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DRB4X5D2U9 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC16.41■□□□□ 0.22
HLA-DRB4X5D2U9 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DRB4X5D2U9 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC16.41■□□□□ 0.22
HLA-DRB4X5D2U9 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC16.41■□□□□ 0.22
HLA-DRB4X5D2U9 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DRB4X5D2U9 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
HLA-DRB4X5D2U9 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
HLA-DRB4X5D2U9 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
HLA-DRB4X5D2U9 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DRB4X5D2U9 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC16.41■□□□□ 0.22
HLA-DRB4X5D2U9 AC099791.2-201ENST00000605725 427 ntBASIC16.41■□□□□ 0.22
HLA-DRB4X5D2U9 AL499627.2-201ENST00000606283 725 ntBASIC16.41■□□□□ 0.22
HLA-DRB4X5D2U9 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DRB4X5D2U9 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DRB4X5D2U9 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
HLA-DRB4X5D2U9 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
HLA-DRB4X5D2U9 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC16.4■□□□□ 0.22
HLA-DRB4X5D2U9 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
HLA-DRB4X5D2U9 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
HLA-DRB4X5D2U9 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DRB4X5D2U9 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DRB4X5D2U9 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DRB4X5D2U9 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DRB4X5D2U9 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC16.4■□□□□ 0.22
HLA-DRB4X5D2U9 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DRB4X5D2U9 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC16.4■□□□□ 0.22
HLA-DRB4X5D2U9 MIR4466-201ENST00000606121 54 ntBASIC16.4■□□□□ 0.22
HLA-DRB4X5D2U9 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DRB4X5D2U9 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DRB4X5D2U9 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DRB4X5D2U9 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DRB4X5D2U9 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DRB4X5D2U9 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
HLA-DRB4X5D2U9 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
HLA-DRB4X5D2U9 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC16.39■□□□□ 0.21
HLA-DRB4X5D2U9 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DRB4X5D2U9 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC16.39■□□□□ 0.21
HLA-DRB4X5D2U9 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
HLA-DRB4X5D2U9 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DRB4X5D2U9 AC006455.2-201ENST00000429931 906 ntBASIC16.39■□□□□ 0.21
HLA-DRB4X5D2U9 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC16.39■□□□□ 0.21
HLA-DRB4X5D2U9 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DRB4X5D2U9 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
HLA-DRB4X5D2U9 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DRB4X5D2U9 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DRB4X5D2U9 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC16.39■□□□□ 0.21
HLA-DRB4X5D2U9 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
HLA-DRB4X5D2U9 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC16.39■□□□□ 0.21
HLA-DRB4X5D2U9 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
HLA-DRB4X5D2U9 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DRB4X5D2U9 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DRB4X5D2U9 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DRB4X5D2U9 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DRB4X5D2U9 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DRB4X5D2U9 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC16.38■□□□□ 0.21
HLA-DRB4X5D2U9 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DRB4X5D2U9 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC16.38■□□□□ 0.21
HLA-DRB4X5D2U9 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC16.38■□□□□ 0.21
HLA-DRB4X5D2U9 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC16.38■□□□□ 0.21
HLA-DRB4X5D2U9 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
HLA-DRB4X5D2U9 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC16.38■□□□□ 0.21
HLA-DRB4X5D2U9 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DRB4X5D2U9 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
HLA-DRB4X5D2U9 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DRB4X5D2U9 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DRB4X5D2U9 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DRB4X5D2U9 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HLA-DRB4X5D2U9 AC004687.1-201ENST00000579003 1625 ntBASIC16.37■□□□□ 0.21
HLA-DRB4X5D2U9 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HLA-DRB4X5D2U9 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC16.37■□□□□ 0.21
HLA-DRB4X5D2U9 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HLA-DRB4X5D2U9 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC16.37■□□□□ 0.21
HLA-DRB4X5D2U9 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC16.37■□□□□ 0.21
HLA-DRB4X5D2U9 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HLA-DRB4X5D2U9 GTSE1-AS1-202ENST00000623117 1518 ntBASIC16.37■□□□□ 0.21
HLA-DRB4X5D2U9 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
HLA-DRB4X5D2U9 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HLA-DRB4X5D2U9 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HLA-DRB4X5D2U9 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC16.37■□□□□ 0.21
HLA-DRB4X5D2U9 pRNA.6-201ENST00000610482 90 ntBASIC16.37■□□□□ 0.21
HLA-DRB4X5D2U9 pRNA.5-201ENST00000612139 90 ntBASIC16.37■□□□□ 0.21
HLA-DRB4X5D2U9 pRNA.11-201ENST00000618423 90 ntBASIC16.37■□□□□ 0.21
HLA-DRB4X5D2U9 pRNA.13-201ENST00000619112 90 ntBASIC16.37■□□□□ 0.21
HLA-DRB4X5D2U9 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC16.37■□□□□ 0.21
HLA-DRB4X5D2U9 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms