Protein–RNA interactions for Protein: Q9Y6Q1

CAPN6, Calpain-6, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN6Q9Y6Q1 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC23.23■■□□□ 1.31
CAPN6Q9Y6Q1 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC23.23■■□□□ 1.31
CAPN6Q9Y6Q1 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC23.23■■□□□ 1.31
CAPN6Q9Y6Q1 DUX4L4-201ENST00000566884 1269 ntBASIC23.23■■□□□ 1.31
CAPN6Q9Y6Q1 MIR6722-201ENST00000617286 78 ntBASIC23.23■■□□□ 1.31
CAPN6Q9Y6Q1 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC23.23■■□□□ 1.31
CAPN6Q9Y6Q1 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
CAPN6Q9Y6Q1 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CAPN6Q9Y6Q1 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC23.23■■□□□ 1.31
CAPN6Q9Y6Q1 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC23.23■■□□□ 1.31
CAPN6Q9Y6Q1 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CAPN6Q9Y6Q1 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CAPN6Q9Y6Q1 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CAPN6Q9Y6Q1 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CAPN6Q9Y6Q1 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
CAPN6Q9Y6Q1 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
CAPN6Q9Y6Q1 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CAPN6Q9Y6Q1 TK2-216ENST00000564917 1156 ntTSL 3 BASIC23.22■■□□□ 1.31
CAPN6Q9Y6Q1 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC23.22■■□□□ 1.31
CAPN6Q9Y6Q1 AC009086.3-201ENST00000623486 1008 ntBASIC23.22■■□□□ 1.31
CAPN6Q9Y6Q1 AC005229.4-201ENST00000610085 2198 ntBASIC23.22■■□□□ 1.31
CAPN6Q9Y6Q1 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC23.22■■□□□ 1.31
CAPN6Q9Y6Q1 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
CAPN6Q9Y6Q1 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
CAPN6Q9Y6Q1 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
CAPN6Q9Y6Q1 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CAPN6Q9Y6Q1 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC23.22■■□□□ 1.31
CAPN6Q9Y6Q1 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CAPN6Q9Y6Q1 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CAPN6Q9Y6Q1 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC23.21■■□□□ 1.31
CAPN6Q9Y6Q1 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC23.21■■□□□ 1.31
CAPN6Q9Y6Q1 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CAPN6Q9Y6Q1 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
CAPN6Q9Y6Q1 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
CAPN6Q9Y6Q1 CLTA-206ENST00000466396 695 ntTSL 2 BASIC23.21■■□□□ 1.31
CAPN6Q9Y6Q1 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC23.21■■□□□ 1.31
CAPN6Q9Y6Q1 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC23.21■■□□□ 1.31
CAPN6Q9Y6Q1 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
CAPN6Q9Y6Q1 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CAPN6Q9Y6Q1 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CAPN6Q9Y6Q1 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CAPN6Q9Y6Q1 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CAPN6Q9Y6Q1 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CAPN6Q9Y6Q1 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CAPN6Q9Y6Q1 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
CAPN6Q9Y6Q1 AL033527.3-201ENST00000566366 1196 ntBASIC23.2■■□□□ 1.3
CAPN6Q9Y6Q1 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC23.2■■□□□ 1.3
CAPN6Q9Y6Q1 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC23.19■■□□□ 1.3
CAPN6Q9Y6Q1 AC004687.1-201ENST00000579003 1625 ntBASIC23.19■■□□□ 1.3
CAPN6Q9Y6Q1 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.19■■□□□ 1.3
CAPN6Q9Y6Q1 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC23.19■■□□□ 1.3
CAPN6Q9Y6Q1 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
CAPN6Q9Y6Q1 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CAPN6Q9Y6Q1 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
CAPN6Q9Y6Q1 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
CAPN6Q9Y6Q1 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC23.19■■□□□ 1.3
CAPN6Q9Y6Q1 AC012354.3-201ENST00000623734 483 ntBASIC23.19■■□□□ 1.3
CAPN6Q9Y6Q1 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CAPN6Q9Y6Q1 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CAPN6Q9Y6Q1 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC23.18■■□□□ 1.3
CAPN6Q9Y6Q1 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CAPN6Q9Y6Q1 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC23.18■■□□□ 1.3
CAPN6Q9Y6Q1 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC23.18■■□□□ 1.3
CAPN6Q9Y6Q1 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC23.18■■□□□ 1.3
CAPN6Q9Y6Q1 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CAPN6Q9Y6Q1 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC23.18■■□□□ 1.3
CAPN6Q9Y6Q1 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CAPN6Q9Y6Q1 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23.18■■□□□ 1.3
CAPN6Q9Y6Q1 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
CAPN6Q9Y6Q1 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC23.18■■□□□ 1.3
CAPN6Q9Y6Q1 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
CAPN6Q9Y6Q1 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CAPN6Q9Y6Q1 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
CAPN6Q9Y6Q1 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC23.18■■□□□ 1.3
CAPN6Q9Y6Q1 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CAPN6Q9Y6Q1 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC23.17■■□□□ 1.3
CAPN6Q9Y6Q1 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CAPN6Q9Y6Q1 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
CAPN6Q9Y6Q1 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CAPN6Q9Y6Q1 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC23.17■■□□□ 1.3
CAPN6Q9Y6Q1 AC021242.3-201ENST00000607598 1377 ntBASIC23.17■■□□□ 1.3
CAPN6Q9Y6Q1 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CAPN6Q9Y6Q1 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
CAPN6Q9Y6Q1 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC23.17■■□□□ 1.3
CAPN6Q9Y6Q1 YBX1P4-201ENST00000392794 808 ntBASIC23.17■■□□□ 1.3
CAPN6Q9Y6Q1 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC23.17■■□□□ 1.3
CAPN6Q9Y6Q1 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
CAPN6Q9Y6Q1 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC23.17■■□□□ 1.3
CAPN6Q9Y6Q1 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC23.17■■□□□ 1.3
CAPN6Q9Y6Q1 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CAPN6Q9Y6Q1 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC23.16■■□□□ 1.3
CAPN6Q9Y6Q1 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CAPN6Q9Y6Q1 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CAPN6Q9Y6Q1 CA15P2-201ENST00000611168 834 ntBASIC23.16■■□□□ 1.3
CAPN6Q9Y6Q1 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
CAPN6Q9Y6Q1 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
CAPN6Q9Y6Q1 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC23.16■■□□□ 1.3
CAPN6Q9Y6Q1 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CAPN6Q9Y6Q1 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CAPN6Q9Y6Q1 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms