Protein–RNA interactions for Protein: Q9Y663

HS3ST3A1, Heparan sulfate glucosamine 3-O-sulfotransferase 3A1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST3A1Q9Y663 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HS3ST3A1Q9Y663 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HS3ST3A1Q9Y663 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HS3ST3A1Q9Y663 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
HS3ST3A1Q9Y663 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.06
HS3ST3A1Q9Y663 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
HS3ST3A1Q9Y663 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.64■■□□□ 1.06
HS3ST3A1Q9Y663 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.64■■□□□ 1.05
HS3ST3A1Q9Y663 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.64■■□□□ 1.05
HS3ST3A1Q9Y663 AC092437.1-201ENST00000624794 1048 ntBASIC21.64■■□□□ 1.05
HS3ST3A1Q9Y663 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.64■■□□□ 1.05
HS3ST3A1Q9Y663 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
HS3ST3A1Q9Y663 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
HS3ST3A1Q9Y663 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.63■■□□□ 1.05
HS3ST3A1Q9Y663 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HS3ST3A1Q9Y663 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HS3ST3A1Q9Y663 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
HS3ST3A1Q9Y663 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.63■■□□□ 1.05
HS3ST3A1Q9Y663 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.63■■□□□ 1.05
HS3ST3A1Q9Y663 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.63■■□□□ 1.05
HS3ST3A1Q9Y663 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
HS3ST3A1Q9Y663 DUSP8P3-201ENST00000399571 1760 ntBASIC21.63■■□□□ 1.05
HS3ST3A1Q9Y663 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HS3ST3A1Q9Y663 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HS3ST3A1Q9Y663 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.63■■□□□ 1.05
HS3ST3A1Q9Y663 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
HS3ST3A1Q9Y663 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
HS3ST3A1Q9Y663 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
HS3ST3A1Q9Y663 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
HS3ST3A1Q9Y663 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
HS3ST3A1Q9Y663 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.62■■□□□ 1.05
HS3ST3A1Q9Y663 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.62■■□□□ 1.05
HS3ST3A1Q9Y663 RARRES2P11-201ENST00000635158 484 ntBASIC21.62■■□□□ 1.05
HS3ST3A1Q9Y663 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.62■■□□□ 1.05
HS3ST3A1Q9Y663 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.61■■□□□ 1.05
HS3ST3A1Q9Y663 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
HS3ST3A1Q9Y663 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.61■■□□□ 1.05
HS3ST3A1Q9Y663 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.61■■□□□ 1.05
HS3ST3A1Q9Y663 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
HS3ST3A1Q9Y663 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
HS3ST3A1Q9Y663 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
HS3ST3A1Q9Y663 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.61■■□□□ 1.05
HS3ST3A1Q9Y663 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.61■■□□□ 1.05
HS3ST3A1Q9Y663 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
HS3ST3A1Q9Y663 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
HS3ST3A1Q9Y663 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
HS3ST3A1Q9Y663 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
HS3ST3A1Q9Y663 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.6■■□□□ 1.05
HS3ST3A1Q9Y663 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.6■■□□□ 1.05
HS3ST3A1Q9Y663 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HS3ST3A1Q9Y663 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
HS3ST3A1Q9Y663 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
HS3ST3A1Q9Y663 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
HS3ST3A1Q9Y663 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.59■■□□□ 1.05
HS3ST3A1Q9Y663 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
HS3ST3A1Q9Y663 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HS3ST3A1Q9Y663 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HS3ST3A1Q9Y663 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
HS3ST3A1Q9Y663 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.58■■□□□ 1.05
HS3ST3A1Q9Y663 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.58■■□□□ 1.05
HS3ST3A1Q9Y663 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
HS3ST3A1Q9Y663 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.58■■□□□ 1.05
HS3ST3A1Q9Y663 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.58■■□□□ 1.05
HS3ST3A1Q9Y663 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
HS3ST3A1Q9Y663 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
HS3ST3A1Q9Y663 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.58■■□□□ 1.04
HS3ST3A1Q9Y663 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.58■■□□□ 1.04
HS3ST3A1Q9Y663 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
HS3ST3A1Q9Y663 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
HS3ST3A1Q9Y663 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
HS3ST3A1Q9Y663 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.57■■□□□ 1.04
HS3ST3A1Q9Y663 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
HS3ST3A1Q9Y663 AC004911.1-201ENST00000416316 871 ntBASIC21.57■■□□□ 1.04
HS3ST3A1Q9Y663 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.57■■□□□ 1.04
HS3ST3A1Q9Y663 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.57■■□□□ 1.04
HS3ST3A1Q9Y663 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.57■■□□□ 1.04
HS3ST3A1Q9Y663 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.57■■□□□ 1.04
HS3ST3A1Q9Y663 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.57■■□□□ 1.04
HS3ST3A1Q9Y663 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
HS3ST3A1Q9Y663 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
HS3ST3A1Q9Y663 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HS3ST3A1Q9Y663 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HS3ST3A1Q9Y663 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
HS3ST3A1Q9Y663 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HS3ST3A1Q9Y663 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.56■■□□□ 1.04
HS3ST3A1Q9Y663 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.56■■□□□ 1.04
HS3ST3A1Q9Y663 AC090192.1-201ENST00000517740 490 ntBASIC21.56■■□□□ 1.04
HS3ST3A1Q9Y663 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.56■■□□□ 1.04
HS3ST3A1Q9Y663 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.56■■□□□ 1.04
HS3ST3A1Q9Y663 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.56■■□□□ 1.04
HS3ST3A1Q9Y663 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.56■■□□□ 1.04
HS3ST3A1Q9Y663 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.56■■□□□ 1.04
HS3ST3A1Q9Y663 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.56■■□□□ 1.04
HS3ST3A1Q9Y663 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HS3ST3A1Q9Y663 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
HS3ST3A1Q9Y663 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.55■■□□□ 1.04
HS3ST3A1Q9Y663 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.55■■□□□ 1.04
HS3ST3A1Q9Y663 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.55■■□□□ 1.04
HS3ST3A1Q9Y663 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
HS3ST3A1Q9Y663 AP004607.4-201ENST00000530158 1459 ntBASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms