Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
HCFC2Q9Y5Z7 KRT18P11-201ENST00000435214 1283 ntBASIC23.17■■□□□ 1.3
HCFC2Q9Y5Z7 AC010141.3-201ENST00000456659 717 ntBASIC23.17■■□□□ 1.3
HCFC2Q9Y5Z7 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC23.17■■□□□ 1.3
HCFC2Q9Y5Z7 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC23.17■■□□□ 1.3
HCFC2Q9Y5Z7 AC087239.1-201ENST00000622671 572 ntBASIC23.17■■□□□ 1.3
HCFC2Q9Y5Z7 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
HCFC2Q9Y5Z7 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC23.17■■□□□ 1.3
HCFC2Q9Y5Z7 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
HCFC2Q9Y5Z7 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
HCFC2Q9Y5Z7 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
HCFC2Q9Y5Z7 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
HCFC2Q9Y5Z7 AC020928.2-201ENST00000588717 2197 ntBASIC23.16■■□□□ 1.3
HCFC2Q9Y5Z7 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
HCFC2Q9Y5Z7 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC23.16■■□□□ 1.3
HCFC2Q9Y5Z7 MIR663A-201ENST00000385250 93 ntBASIC23.16■■□□□ 1.3
HCFC2Q9Y5Z7 SPI1-203ENST00000533030 661 ntTSL 2 BASIC23.16■■□□□ 1.3
HCFC2Q9Y5Z7 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC23.16■■□□□ 1.3
HCFC2Q9Y5Z7 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
HCFC2Q9Y5Z7 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
HCFC2Q9Y5Z7 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
HCFC2Q9Y5Z7 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
HCFC2Q9Y5Z7 ESRRAP2-201ENST00000418437 1549 ntBASIC23.15■■□□□ 1.3
HCFC2Q9Y5Z7 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC23.15■■□□□ 1.3
HCFC2Q9Y5Z7 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC23.15■■□□□ 1.3
HCFC2Q9Y5Z7 CPT2-209ENST00000636935 803 ntTSL 5 BASIC23.15■■□□□ 1.3
HCFC2Q9Y5Z7 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
HCFC2Q9Y5Z7 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
HCFC2Q9Y5Z7 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
HCFC2Q9Y5Z7 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
HCFC2Q9Y5Z7 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC23.14■■□□□ 1.3
HCFC2Q9Y5Z7 EED-207ENST00000528180 1745 ntTSL 5 BASIC23.14■■□□□ 1.3
HCFC2Q9Y5Z7 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
HCFC2Q9Y5Z7 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
HCFC2Q9Y5Z7 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
HCFC2Q9Y5Z7 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
HCFC2Q9Y5Z7 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
HCFC2Q9Y5Z7 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
HCFC2Q9Y5Z7 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC23.14■■□□□ 1.29
HCFC2Q9Y5Z7 AC079140.4-201ENST00000507448 529 ntBASIC23.14■■□□□ 1.29
HCFC2Q9Y5Z7 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
HCFC2Q9Y5Z7 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
HCFC2Q9Y5Z7 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
HCFC2Q9Y5Z7 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.14■■□□□ 1.29
HCFC2Q9Y5Z7 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
HCFC2Q9Y5Z7 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC23.13■■□□□ 1.29
HCFC2Q9Y5Z7 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC23.13■■□□□ 1.29
HCFC2Q9Y5Z7 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC23.13■■□□□ 1.29
HCFC2Q9Y5Z7 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC23.13■■□□□ 1.29
HCFC2Q9Y5Z7 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC23.13■■□□□ 1.29
HCFC2Q9Y5Z7 WT1-AS_3.1-201ENST00000613262 234 ntBASIC23.13■■□□□ 1.29
HCFC2Q9Y5Z7 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
HCFC2Q9Y5Z7 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC23.13■■□□□ 1.29
HCFC2Q9Y5Z7 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC23.13■■□□□ 1.29
HCFC2Q9Y5Z7 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC23.13■■□□□ 1.29
HCFC2Q9Y5Z7 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
HCFC2Q9Y5Z7 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
HCFC2Q9Y5Z7 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
HCFC2Q9Y5Z7 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
HCFC2Q9Y5Z7 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
HCFC2Q9Y5Z7 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
HCFC2Q9Y5Z7 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC23.12■■□□□ 1.29
HCFC2Q9Y5Z7 MDK-213ENST00000617138 635 ntTSL 2 BASIC23.12■■□□□ 1.29
HCFC2Q9Y5Z7 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
HCFC2Q9Y5Z7 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC23.12■■□□□ 1.29
HCFC2Q9Y5Z7 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
HCFC2Q9Y5Z7 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
HCFC2Q9Y5Z7 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
HCFC2Q9Y5Z7 GPX1P1-201ENST00000388829 606 ntBASIC23.11■■□□□ 1.29
HCFC2Q9Y5Z7 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC23.11■■□□□ 1.29
HCFC2Q9Y5Z7 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC23.11■■□□□ 1.29
HCFC2Q9Y5Z7 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
HCFC2Q9Y5Z7 OXCT2P1-201ENST00000447263 1535 ntBASIC23.1■■□□□ 1.29
HCFC2Q9Y5Z7 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC23.1■■□□□ 1.29
HCFC2Q9Y5Z7 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
HCFC2Q9Y5Z7 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
HCFC2Q9Y5Z7 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC23.1■■□□□ 1.29
HCFC2Q9Y5Z7 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC23.1■■□□□ 1.29
HCFC2Q9Y5Z7 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
HCFC2Q9Y5Z7 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
HCFC2Q9Y5Z7 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
HCFC2Q9Y5Z7 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC23.09■■□□□ 1.29
HCFC2Q9Y5Z7 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC23.09■■□□□ 1.29
HCFC2Q9Y5Z7 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC23.09■■□□□ 1.29
HCFC2Q9Y5Z7 AL353803.4-201ENST00000565882 1934 ntBASIC23.09■■□□□ 1.29
HCFC2Q9Y5Z7 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
HCFC2Q9Y5Z7 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
HCFC2Q9Y5Z7 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC23.08■■□□□ 1.29
HCFC2Q9Y5Z7 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
HCFC2Q9Y5Z7 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
HCFC2Q9Y5Z7 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC23.08■■□□□ 1.29
HCFC2Q9Y5Z7 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
HCFC2Q9Y5Z7 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.28
HCFC2Q9Y5Z7 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC23.08■■□□□ 1.28
HCFC2Q9Y5Z7 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.28
HCFC2Q9Y5Z7 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
HCFC2Q9Y5Z7 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
HCFC2Q9Y5Z7 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
HCFC2Q9Y5Z7 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC23.07■■□□□ 1.28
HCFC2Q9Y5Z7 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms