Protein–RNA interactions for Protein: Q9Y3Q8

TSC22D4, TSC22 domain family protein 4, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D4Q9Y3Q8 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.17■□□□□ 0.98
TSC22D4Q9Y3Q8 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
TSC22D4Q9Y3Q8 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TSC22D4Q9Y3Q8 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TSC22D4Q9Y3Q8 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.17■□□□□ 0.98
TSC22D4Q9Y3Q8 AC092171.4-201ENST00000609130 632 ntBASIC21.17■□□□□ 0.98
TSC22D4Q9Y3Q8 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TSC22D4Q9Y3Q8 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.17■□□□□ 0.98
TSC22D4Q9Y3Q8 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.17■□□□□ 0.98
TSC22D4Q9Y3Q8 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
TSC22D4Q9Y3Q8 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TSC22D4Q9Y3Q8 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.17■□□□□ 0.98
TSC22D4Q9Y3Q8 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TSC22D4Q9Y3Q8 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.16■□□□□ 0.98
TSC22D4Q9Y3Q8 AC233723.2-201ENST00000623798 2106 ntBASIC21.16■□□□□ 0.98
TSC22D4Q9Y3Q8 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TSC22D4Q9Y3Q8 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.16■□□□□ 0.98
TSC22D4Q9Y3Q8 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TSC22D4Q9Y3Q8 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TSC22D4Q9Y3Q8 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.16■□□□□ 0.98
TSC22D4Q9Y3Q8 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TSC22D4Q9Y3Q8 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.16■□□□□ 0.98
TSC22D4Q9Y3Q8 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TSC22D4Q9Y3Q8 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TSC22D4Q9Y3Q8 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
TSC22D4Q9Y3Q8 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.16■□□□□ 0.98
TSC22D4Q9Y3Q8 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TSC22D4Q9Y3Q8 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TSC22D4Q9Y3Q8 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TSC22D4Q9Y3Q8 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
TSC22D4Q9Y3Q8 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TSC22D4Q9Y3Q8 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TSC22D4Q9Y3Q8 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TSC22D4Q9Y3Q8 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.15■□□□□ 0.98
TSC22D4Q9Y3Q8 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.15■□□□□ 0.98
TSC22D4Q9Y3Q8 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TSC22D4Q9Y3Q8 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
TSC22D4Q9Y3Q8 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
TSC22D4Q9Y3Q8 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
TSC22D4Q9Y3Q8 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TSC22D4Q9Y3Q8 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.15■□□□□ 0.98
TSC22D4Q9Y3Q8 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.14■□□□□ 0.98
TSC22D4Q9Y3Q8 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.14■□□□□ 0.98
TSC22D4Q9Y3Q8 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
TSC22D4Q9Y3Q8 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TSC22D4Q9Y3Q8 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.14■□□□□ 0.98
TSC22D4Q9Y3Q8 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TSC22D4Q9Y3Q8 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
TSC22D4Q9Y3Q8 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.14■□□□□ 0.98
TSC22D4Q9Y3Q8 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.14■□□□□ 0.97
TSC22D4Q9Y3Q8 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
TSC22D4Q9Y3Q8 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.14■□□□□ 0.97
TSC22D4Q9Y3Q8 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.14■□□□□ 0.97
TSC22D4Q9Y3Q8 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.14■□□□□ 0.97
TSC22D4Q9Y3Q8 SRD5A1P1-201ENST00000442297 786 ntBASIC21.14■□□□□ 0.97
TSC22D4Q9Y3Q8 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.14■□□□□ 0.97
TSC22D4Q9Y3Q8 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.14■□□□□ 0.97
TSC22D4Q9Y3Q8 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TSC22D4Q9Y3Q8 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TSC22D4Q9Y3Q8 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
TSC22D4Q9Y3Q8 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
TSC22D4Q9Y3Q8 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TSC22D4Q9Y3Q8 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
TSC22D4Q9Y3Q8 AL117328.2-201ENST00000624617 1940 ntBASIC21.14■□□□□ 0.97
TSC22D4Q9Y3Q8 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.13■□□□□ 0.97
TSC22D4Q9Y3Q8 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TSC22D4Q9Y3Q8 AC087742.1-201ENST00000575880 1738 ntBASIC21.13■□□□□ 0.97
TSC22D4Q9Y3Q8 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.13■□□□□ 0.97
TSC22D4Q9Y3Q8 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TSC22D4Q9Y3Q8 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
TSC22D4Q9Y3Q8 AC099791.2-201ENST00000605725 427 ntBASIC21.13■□□□□ 0.97
TSC22D4Q9Y3Q8 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TSC22D4Q9Y3Q8 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TSC22D4Q9Y3Q8 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TSC22D4Q9Y3Q8 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TSC22D4Q9Y3Q8 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.13■□□□□ 0.97
TSC22D4Q9Y3Q8 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
TSC22D4Q9Y3Q8 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TSC22D4Q9Y3Q8 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
TSC22D4Q9Y3Q8 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TSC22D4Q9Y3Q8 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
TSC22D4Q9Y3Q8 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TSC22D4Q9Y3Q8 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
TSC22D4Q9Y3Q8 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
TSC22D4Q9Y3Q8 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
TSC22D4Q9Y3Q8 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TSC22D4Q9Y3Q8 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TSC22D4Q9Y3Q8 AL121603.2-201ENST00000557373 2117 ntBASIC21.12■□□□□ 0.97
TSC22D4Q9Y3Q8 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.12■□□□□ 0.97
TSC22D4Q9Y3Q8 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TSC22D4Q9Y3Q8 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.12■□□□□ 0.97
TSC22D4Q9Y3Q8 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TSC22D4Q9Y3Q8 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TSC22D4Q9Y3Q8 AC004687.1-201ENST00000579003 1625 ntBASIC21.11■□□□□ 0.97
TSC22D4Q9Y3Q8 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
TSC22D4Q9Y3Q8 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TSC22D4Q9Y3Q8 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
TSC22D4Q9Y3Q8 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.11■□□□□ 0.97
TSC22D4Q9Y3Q8 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TSC22D4Q9Y3Q8 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms