Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.33■■□□□ 1.01
RNF11Q9Y3C5 AL117332.1-201ENST00000622628 974 ntBASIC21.33■■□□□ 1.01
RNF11Q9Y3C5 AC080038.3-201ENST00000623346 1952 ntBASIC21.33■■□□□ 1.01
RNF11Q9Y3C5 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RNF11Q9Y3C5 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
RNF11Q9Y3C5 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.33■■□□□ 1
RNF11Q9Y3C5 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.33■■□□□ 1
RNF11Q9Y3C5 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.33■■□□□ 1
RNF11Q9Y3C5 AC004687.1-201ENST00000579003 1625 ntBASIC21.33■■□□□ 1
RNF11Q9Y3C5 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RNF11Q9Y3C5 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RNF11Q9Y3C5 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.32■■□□□ 1
RNF11Q9Y3C5 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RNF11Q9Y3C5 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
RNF11Q9Y3C5 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.32■■□□□ 1
RNF11Q9Y3C5 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
RNF11Q9Y3C5 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.32■■□□□ 1
RNF11Q9Y3C5 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
RNF11Q9Y3C5 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.31■■□□□ 1
RNF11Q9Y3C5 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.31■■□□□ 1
RNF11Q9Y3C5 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
RNF11Q9Y3C5 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.31■■□□□ 1
RNF11Q9Y3C5 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RNF11Q9Y3C5 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.31■■□□□ 1
RNF11Q9Y3C5 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RNF11Q9Y3C5 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RNF11Q9Y3C5 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.31■■□□□ 1
RNF11Q9Y3C5 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.31■■□□□ 1
RNF11Q9Y3C5 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RNF11Q9Y3C5 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.3■■□□□ 1
RNF11Q9Y3C5 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.3■■□□□ 1
RNF11Q9Y3C5 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
RNF11Q9Y3C5 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
RNF11Q9Y3C5 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
RNF11Q9Y3C5 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RNF11Q9Y3C5 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.3■■□□□ 1
RNF11Q9Y3C5 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RNF11Q9Y3C5 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.3■■□□□ 1
RNF11Q9Y3C5 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
RNF11Q9Y3C5 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.3■■□□□ 1
RNF11Q9Y3C5 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.3■■□□□ 1
RNF11Q9Y3C5 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
RNF11Q9Y3C5 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RNF11Q9Y3C5 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.29■■□□□ 1
RNF11Q9Y3C5 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RNF11Q9Y3C5 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.29■■□□□ 1
RNF11Q9Y3C5 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RNF11Q9Y3C5 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
RNF11Q9Y3C5 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RNF11Q9Y3C5 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.29■■□□□ 1
RNF11Q9Y3C5 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.29■■□□□ 1
RNF11Q9Y3C5 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RNF11Q9Y3C5 AC139530.1-201ENST00000575312 1977 ntBASIC21.29■■□□□ 1
RNF11Q9Y3C5 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
RNF11Q9Y3C5 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RNF11Q9Y3C5 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RNF11Q9Y3C5 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RNF11Q9Y3C5 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
RNF11Q9Y3C5 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RNF11Q9Y3C5 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RNF11Q9Y3C5 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.28■■□□□ 1
RNF11Q9Y3C5 LINC01960-201ENST00000563759 1884 ntBASIC21.28■■□□□ 1
RNF11Q9Y3C5 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RNF11Q9Y3C5 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.28■■□□□ 1
RNF11Q9Y3C5 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.28■■□□□ 1
RNF11Q9Y3C5 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.28■■□□□ 1
RNF11Q9Y3C5 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.28■■□□□ 1
RNF11Q9Y3C5 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RNF11Q9Y3C5 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RNF11Q9Y3C5 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RNF11Q9Y3C5 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.28■■□□□ 1
RNF11Q9Y3C5 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.28■■□□□ 1
RNF11Q9Y3C5 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RNF11Q9Y3C5 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.27■■□□□ 1
RNF11Q9Y3C5 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.27■■□□□ 1
RNF11Q9Y3C5 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RNF11Q9Y3C5 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.27■■□□□ 1
RNF11Q9Y3C5 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
RNF11Q9Y3C5 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.27■■□□□ 1
RNF11Q9Y3C5 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
RNF11Q9Y3C5 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.27■■□□□ 1
RNF11Q9Y3C5 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RNF11Q9Y3C5 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RNF11Q9Y3C5 AL356740.2-201ENST00000601559 647 ntBASIC21.27■■□□□ 1
RNF11Q9Y3C5 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
RNF11Q9Y3C5 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
RNF11Q9Y3C5 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
RNF11Q9Y3C5 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
RNF11Q9Y3C5 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF11Q9Y3C5 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF11Q9Y3C5 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.26■□□□□ 0.99
RNF11Q9Y3C5 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF11Q9Y3C5 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.26■□□□□ 0.99
RNF11Q9Y3C5 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RNF11Q9Y3C5 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF11Q9Y3C5 MIR3621-201ENST00000580529 85 ntBASIC21.26■□□□□ 0.99
RNF11Q9Y3C5 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.26■□□□□ 0.99
RNF11Q9Y3C5 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF11Q9Y3C5 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
RNF11Q9Y3C5 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms