Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
RCL1Q9Y2P8 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RCL1Q9Y2P8 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RCL1Q9Y2P8 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
RCL1Q9Y2P8 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RCL1Q9Y2P8 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
RCL1Q9Y2P8 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RCL1Q9Y2P8 LONRF2P2-201ENST00000439212 571 ntBASIC17.86■□□□□ 0.45
RCL1Q9Y2P8 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RCL1Q9Y2P8 RPS2-202ENST00000526522 924 ntTSL 2 BASIC17.86■□□□□ 0.45
RCL1Q9Y2P8 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RCL1Q9Y2P8 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RCL1Q9Y2P8 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RCL1Q9Y2P8 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC17.86■□□□□ 0.45
RCL1Q9Y2P8 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RCL1Q9Y2P8 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RCL1Q9Y2P8 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RCL1Q9Y2P8 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RCL1Q9Y2P8 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RCL1Q9Y2P8 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
RCL1Q9Y2P8 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC17.85■□□□□ 0.45
RCL1Q9Y2P8 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC17.85■□□□□ 0.45
RCL1Q9Y2P8 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RCL1Q9Y2P8 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC17.85■□□□□ 0.45
RCL1Q9Y2P8 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RCL1Q9Y2P8 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RCL1Q9Y2P8 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RCL1Q9Y2P8 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RCL1Q9Y2P8 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RCL1Q9Y2P8 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
RCL1Q9Y2P8 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC17.84■□□□□ 0.45
RCL1Q9Y2P8 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
RCL1Q9Y2P8 USF2-207ENST00000595068 1612 ntTSL 5 BASIC17.84■□□□□ 0.45
RCL1Q9Y2P8 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RCL1Q9Y2P8 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RCL1Q9Y2P8 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC17.84■□□□□ 0.45
RCL1Q9Y2P8 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC17.84■□□□□ 0.45
RCL1Q9Y2P8 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RCL1Q9Y2P8 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RCL1Q9Y2P8 LBH-205ENST00000407930 756 ntTSL 2 BASIC17.84■□□□□ 0.45
RCL1Q9Y2P8 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RCL1Q9Y2P8 GPX1-201ENST00000419349 1106 ntBASIC17.84■□□□□ 0.45
RCL1Q9Y2P8 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC17.84■□□□□ 0.45
RCL1Q9Y2P8 AL592293.1-201ENST00000502889 1188 ntBASIC17.84■□□□□ 0.45
RCL1Q9Y2P8 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC17.84■□□□□ 0.45
RCL1Q9Y2P8 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
RCL1Q9Y2P8 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RCL1Q9Y2P8 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RCL1Q9Y2P8 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
RCL1Q9Y2P8 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
RCL1Q9Y2P8 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC17.83■□□□□ 0.45
RCL1Q9Y2P8 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
RCL1Q9Y2P8 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
RCL1Q9Y2P8 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC17.83■□□□□ 0.45
RCL1Q9Y2P8 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
RCL1Q9Y2P8 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
RCL1Q9Y2P8 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
RCL1Q9Y2P8 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RCL1Q9Y2P8 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RCL1Q9Y2P8 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RCL1Q9Y2P8 MIR6765-201ENST00000614092 87 ntBASIC17.83■□□□□ 0.44
RCL1Q9Y2P8 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
RCL1Q9Y2P8 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC17.83■□□□□ 0.44
RCL1Q9Y2P8 GAK-223ENST00000628912 497 ntTSL 5 BASIC17.83■□□□□ 0.44
RCL1Q9Y2P8 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RCL1Q9Y2P8 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RCL1Q9Y2P8 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RCL1Q9Y2P8 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC17.83■□□□□ 0.44
RCL1Q9Y2P8 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RCL1Q9Y2P8 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RCL1Q9Y2P8 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RCL1Q9Y2P8 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RCL1Q9Y2P8 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC17.82■□□□□ 0.44
RCL1Q9Y2P8 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
RCL1Q9Y2P8 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RCL1Q9Y2P8 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RCL1Q9Y2P8 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
RCL1Q9Y2P8 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
RCL1Q9Y2P8 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RCL1Q9Y2P8 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC17.82■□□□□ 0.44
RCL1Q9Y2P8 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
RCL1Q9Y2P8 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RCL1Q9Y2P8 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RCL1Q9Y2P8 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.81■□□□□ 0.44
RCL1Q9Y2P8 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RCL1Q9Y2P8 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RCL1Q9Y2P8 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
RCL1Q9Y2P8 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC17.81■□□□□ 0.44
RCL1Q9Y2P8 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RCL1Q9Y2P8 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RCL1Q9Y2P8 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RCL1Q9Y2P8 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RCL1Q9Y2P8 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RCL1Q9Y2P8 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC17.81■□□□□ 0.44
RCL1Q9Y2P8 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RCL1Q9Y2P8 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RCL1Q9Y2P8 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
RCL1Q9Y2P8 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
RCL1Q9Y2P8 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
RCL1Q9Y2P8 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms