Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
CTSFQ9UBX1 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CTSFQ9UBX1 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CTSFQ9UBX1 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CTSFQ9UBX1 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
CTSFQ9UBX1 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CTSFQ9UBX1 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CTSFQ9UBX1 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CTSFQ9UBX1 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CTSFQ9UBX1 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CTSFQ9UBX1 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.64■□□□□ 0.89
CTSFQ9UBX1 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.64■□□□□ 0.89
CTSFQ9UBX1 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CTSFQ9UBX1 AL162430.1-201ENST00000480705 870 ntBASIC20.64■□□□□ 0.89
CTSFQ9UBX1 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.64■□□□□ 0.89
CTSFQ9UBX1 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CTSFQ9UBX1 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CTSFQ9UBX1 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.64■□□□□ 0.89
CTSFQ9UBX1 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CTSFQ9UBX1 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTSFQ9UBX1 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.63■□□□□ 0.89
CTSFQ9UBX1 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTSFQ9UBX1 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTSFQ9UBX1 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.63■□□□□ 0.89
CTSFQ9UBX1 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.63■□□□□ 0.89
CTSFQ9UBX1 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.63■□□□□ 0.89
CTSFQ9UBX1 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.63■□□□□ 0.89
CTSFQ9UBX1 AC068587.7-201ENST00000641602 218 ntBASIC20.63■□□□□ 0.89
CTSFQ9UBX1 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CTSFQ9UBX1 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTSFQ9UBX1 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTSFQ9UBX1 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.62■□□□□ 0.89
CTSFQ9UBX1 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.62■□□□□ 0.89
CTSFQ9UBX1 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.62■□□□□ 0.89
CTSFQ9UBX1 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTSFQ9UBX1 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.62■□□□□ 0.89
CTSFQ9UBX1 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.62■□□□□ 0.89
CTSFQ9UBX1 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.62■□□□□ 0.89
CTSFQ9UBX1 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.62■□□□□ 0.89
CTSFQ9UBX1 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.62■□□□□ 0.89
CTSFQ9UBX1 AC087239.1-201ENST00000622671 572 ntBASIC20.62■□□□□ 0.89
CTSFQ9UBX1 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTSFQ9UBX1 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
CTSFQ9UBX1 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.62■□□□□ 0.89
CTSFQ9UBX1 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.62■□□□□ 0.89
CTSFQ9UBX1 DUSP8P3-201ENST00000399571 1760 ntBASIC20.62■□□□□ 0.89
CTSFQ9UBX1 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.61■□□□□ 0.89
CTSFQ9UBX1 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTSFQ9UBX1 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTSFQ9UBX1 AC010141.3-201ENST00000456659 717 ntBASIC20.61■□□□□ 0.89
CTSFQ9UBX1 AC092666.2-201ENST00000613287 246 ntBASIC20.61■□□□□ 0.89
CTSFQ9UBX1 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.61■□□□□ 0.89
CTSFQ9UBX1 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTSFQ9UBX1 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTSFQ9UBX1 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTSFQ9UBX1 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
CTSFQ9UBX1 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.6■□□□□ 0.89
CTSFQ9UBX1 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.6■□□□□ 0.89
CTSFQ9UBX1 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.6■□□□□ 0.89
CTSFQ9UBX1 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CTSFQ9UBX1 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.6■□□□□ 0.89
CTSFQ9UBX1 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.6■□□□□ 0.89
CTSFQ9UBX1 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.6■□□□□ 0.89
CTSFQ9UBX1 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.6■□□□□ 0.89
CTSFQ9UBX1 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTSFQ9UBX1 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CTSFQ9UBX1 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTSFQ9UBX1 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTSFQ9UBX1 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
CTSFQ9UBX1 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CTSFQ9UBX1 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTSFQ9UBX1 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTSFQ9UBX1 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTSFQ9UBX1 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CTSFQ9UBX1 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CTSFQ9UBX1 AC123595.1-201ENST00000440769 1046 ntBASIC20.59■□□□□ 0.89
CTSFQ9UBX1 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CTSFQ9UBX1 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.59■□□□□ 0.89
CTSFQ9UBX1 AC104564.3-201ENST00000582367 638 ntBASIC20.59■□□□□ 0.89
CTSFQ9UBX1 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CTSFQ9UBX1 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.59■□□□□ 0.89
CTSFQ9UBX1 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CTSFQ9UBX1 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CTSFQ9UBX1 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.58■□□□□ 0.89
CTSFQ9UBX1 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
CTSFQ9UBX1 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CTSFQ9UBX1 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.58■□□□□ 0.89
CTSFQ9UBX1 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CTSFQ9UBX1 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CTSFQ9UBX1 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.58■□□□□ 0.89
CTSFQ9UBX1 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CTSFQ9UBX1 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CTSFQ9UBX1 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CTSFQ9UBX1 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
CTSFQ9UBX1 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CTSFQ9UBX1 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.58■□□□□ 0.89
CTSFQ9UBX1 AC034268.1-201ENST00000441047 882 ntBASIC20.58■□□□□ 0.89
CTSFQ9UBX1 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.58■□□□□ 0.89
CTSFQ9UBX1 DUX4L2-201ENST00000561772 1275 ntBASIC20.58■□□□□ 0.89
CTSFQ9UBX1 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms