Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.26■□□□□ 0.99
LRIT1Q9P2V4 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LRIT1Q9P2V4 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LRIT1Q9P2V4 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LRIT1Q9P2V4 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
LRIT1Q9P2V4 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LRIT1Q9P2V4 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
LRIT1Q9P2V4 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.26■□□□□ 0.99
LRIT1Q9P2V4 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.26■□□□□ 0.99
LRIT1Q9P2V4 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.26■□□□□ 0.99
LRIT1Q9P2V4 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
LRIT1Q9P2V4 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LRIT1Q9P2V4 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LRIT1Q9P2V4 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
LRIT1Q9P2V4 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
LRIT1Q9P2V4 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.25■□□□□ 0.99
LRIT1Q9P2V4 AC090192.1-201ENST00000517740 490 ntBASIC21.25■□□□□ 0.99
LRIT1Q9P2V4 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.25■□□□□ 0.99
LRIT1Q9P2V4 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LRIT1Q9P2V4 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.25■□□□□ 0.99
LRIT1Q9P2V4 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LRIT1Q9P2V4 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
LRIT1Q9P2V4 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
LRIT1Q9P2V4 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.24■□□□□ 0.99
LRIT1Q9P2V4 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LRIT1Q9P2V4 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
LRIT1Q9P2V4 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
LRIT1Q9P2V4 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.24■□□□□ 0.99
LRIT1Q9P2V4 AC004911.1-201ENST00000416316 871 ntBASIC21.24■□□□□ 0.99
LRIT1Q9P2V4 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
LRIT1Q9P2V4 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.24■□□□□ 0.99
LRIT1Q9P2V4 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
LRIT1Q9P2V4 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.24■□□□□ 0.99
LRIT1Q9P2V4 BX005040.4-201ENST00000637145 1518 ntBASIC21.24■□□□□ 0.99
LRIT1Q9P2V4 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.23■□□□□ 0.99
LRIT1Q9P2V4 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC21.23■□□□□ 0.99
LRIT1Q9P2V4 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.23■□□□□ 0.99
LRIT1Q9P2V4 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.23■□□□□ 0.99
LRIT1Q9P2V4 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.23■□□□□ 0.99
LRIT1Q9P2V4 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LRIT1Q9P2V4 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LRIT1Q9P2V4 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LRIT1Q9P2V4 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
LRIT1Q9P2V4 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.23■□□□□ 0.99
LRIT1Q9P2V4 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.22■□□□□ 0.99
LRIT1Q9P2V4 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
LRIT1Q9P2V4 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LRIT1Q9P2V4 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.22■□□□□ 0.99
LRIT1Q9P2V4 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.22■□□□□ 0.99
LRIT1Q9P2V4 TPRG1LP1-201ENST00000598702 760 ntBASIC21.22■□□□□ 0.99
LRIT1Q9P2V4 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.22■□□□□ 0.99
LRIT1Q9P2V4 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.22■□□□□ 0.99
LRIT1Q9P2V4 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LRIT1Q9P2V4 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
LRIT1Q9P2V4 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LRIT1Q9P2V4 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
LRIT1Q9P2V4 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
LRIT1Q9P2V4 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
LRIT1Q9P2V4 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LRIT1Q9P2V4 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LRIT1Q9P2V4 SMUG1P1-201ENST00000590640 811 ntBASIC21.21■□□□□ 0.99
LRIT1Q9P2V4 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LRIT1Q9P2V4 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LRIT1Q9P2V4 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LRIT1Q9P2V4 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
LRIT1Q9P2V4 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.2■□□□□ 0.98
LRIT1Q9P2V4 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LRIT1Q9P2V4 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LRIT1Q9P2V4 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.2■□□□□ 0.98
LRIT1Q9P2V4 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.2■□□□□ 0.98
LRIT1Q9P2V4 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.2■□□□□ 0.98
LRIT1Q9P2V4 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.2■□□□□ 0.98
LRIT1Q9P2V4 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.2■□□□□ 0.98
LRIT1Q9P2V4 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LRIT1Q9P2V4 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.2■□□□□ 0.98
LRIT1Q9P2V4 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LRIT1Q9P2V4 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LRIT1Q9P2V4 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.19■□□□□ 0.98
LRIT1Q9P2V4 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.19■□□□□ 0.98
LRIT1Q9P2V4 OXCT2P1-201ENST00000447263 1535 ntBASIC21.19■□□□□ 0.98
LRIT1Q9P2V4 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LRIT1Q9P2V4 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LRIT1Q9P2V4 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.19■□□□□ 0.98
LRIT1Q9P2V4 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LRIT1Q9P2V4 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LRIT1Q9P2V4 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.19■□□□□ 0.98
LRIT1Q9P2V4 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
LRIT1Q9P2V4 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LRIT1Q9P2V4 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LRIT1Q9P2V4 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRIT1Q9P2V4 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRIT1Q9P2V4 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRIT1Q9P2V4 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRIT1Q9P2V4 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRIT1Q9P2V4 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRIT1Q9P2V4 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRIT1Q9P2V4 DLX3-202ENST00000512495 834 ntTSL 2 BASIC21.18■□□□□ 0.98
LRIT1Q9P2V4 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.18■□□□□ 0.98
LRIT1Q9P2V4 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LRIT1Q9P2V4 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms