Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VAPAQ9P0L0 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
VAPAQ9P0L0 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
VAPAQ9P0L0 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
VAPAQ9P0L0 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
VAPAQ9P0L0 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VAPAQ9P0L0 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.72■□□□□ 0.91
VAPAQ9P0L0 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.72■□□□□ 0.91
VAPAQ9P0L0 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.72■□□□□ 0.91
VAPAQ9P0L0 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
VAPAQ9P0L0 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
VAPAQ9P0L0 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.72■□□□□ 0.91
VAPAQ9P0L0 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
VAPAQ9P0L0 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
VAPAQ9P0L0 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.71■□□□□ 0.91
VAPAQ9P0L0 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VAPAQ9P0L0 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
VAPAQ9P0L0 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
VAPAQ9P0L0 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.71■□□□□ 0.91
VAPAQ9P0L0 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
VAPAQ9P0L0 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.71■□□□□ 0.91
VAPAQ9P0L0 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VAPAQ9P0L0 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
VAPAQ9P0L0 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
VAPAQ9P0L0 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.71■□□□□ 0.91
VAPAQ9P0L0 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.71■□□□□ 0.91
VAPAQ9P0L0 AC004687.1-201ENST00000579003 1625 ntBASIC20.71■□□□□ 0.91
VAPAQ9P0L0 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.71■□□□□ 0.91
VAPAQ9P0L0 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
VAPAQ9P0L0 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
VAPAQ9P0L0 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
VAPAQ9P0L0 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.7■□□□□ 0.9
VAPAQ9P0L0 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VAPAQ9P0L0 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
VAPAQ9P0L0 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.7■□□□□ 0.9
VAPAQ9P0L0 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
VAPAQ9P0L0 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VAPAQ9P0L0 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
VAPAQ9P0L0 AL024507.2-201ENST00000606070 2574 ntBASIC20.7■□□□□ 0.9
VAPAQ9P0L0 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
VAPAQ9P0L0 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VAPAQ9P0L0 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.7■□□□□ 0.9
VAPAQ9P0L0 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.69■□□□□ 0.9
VAPAQ9P0L0 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
VAPAQ9P0L0 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
VAPAQ9P0L0 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
VAPAQ9P0L0 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
VAPAQ9P0L0 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VAPAQ9P0L0 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.69■□□□□ 0.9
VAPAQ9P0L0 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VAPAQ9P0L0 AC009102.2-201ENST00000606772 1639 ntBASIC20.69■□□□□ 0.9
VAPAQ9P0L0 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
VAPAQ9P0L0 BX664725.1-201ENST00000438252 379 ntBASIC20.69■□□□□ 0.9
VAPAQ9P0L0 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.69■□□□□ 0.9
VAPAQ9P0L0 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.69■□□□□ 0.9
VAPAQ9P0L0 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VAPAQ9P0L0 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
VAPAQ9P0L0 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
VAPAQ9P0L0 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
VAPAQ9P0L0 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VAPAQ9P0L0 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
VAPAQ9P0L0 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VAPAQ9P0L0 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
VAPAQ9P0L0 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VAPAQ9P0L0 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VAPAQ9P0L0 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VAPAQ9P0L0 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.68■□□□□ 0.9
VAPAQ9P0L0 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VAPAQ9P0L0 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
VAPAQ9P0L0 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
VAPAQ9P0L0 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
VAPAQ9P0L0 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
VAPAQ9P0L0 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VAPAQ9P0L0 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
VAPAQ9P0L0 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.67■□□□□ 0.9
VAPAQ9P0L0 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VAPAQ9P0L0 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.67■□□□□ 0.9
VAPAQ9P0L0 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VAPAQ9P0L0 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.67■□□□□ 0.9
VAPAQ9P0L0 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VAPAQ9P0L0 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
VAPAQ9P0L0 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
VAPAQ9P0L0 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.66■□□□□ 0.9
VAPAQ9P0L0 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
VAPAQ9P0L0 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
VAPAQ9P0L0 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
VAPAQ9P0L0 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.66■□□□□ 0.9
VAPAQ9P0L0 CA15P2-201ENST00000611168 834 ntBASIC20.66■□□□□ 0.9
VAPAQ9P0L0 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
VAPAQ9P0L0 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.66■□□□□ 0.9
VAPAQ9P0L0 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
VAPAQ9P0L0 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VAPAQ9P0L0 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
VAPAQ9P0L0 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VAPAQ9P0L0 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VAPAQ9P0L0 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
VAPAQ9P0L0 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.65■□□□□ 0.9
VAPAQ9P0L0 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.65■□□□□ 0.9
VAPAQ9P0L0 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.65■□□□□ 0.9
VAPAQ9P0L0 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms