Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 AL109923.1-201ENST00000618799 583 ntBASIC23.41■■□□□ 1.34
TLR9Q9NR96 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TLR9Q9NR96 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
TLR9Q9NR96 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TLR9Q9NR96 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
TLR9Q9NR96 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TLR9Q9NR96 AC138932.3-201ENST00000567634 1902 ntBASIC23.41■■□□□ 1.34
TLR9Q9NR96 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
TLR9Q9NR96 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
TLR9Q9NR96 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TLR9Q9NR96 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC23.4■■□□□ 1.34
TLR9Q9NR96 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TLR9Q9NR96 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
TLR9Q9NR96 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TLR9Q9NR96 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TLR9Q9NR96 KRT18P11-201ENST00000435214 1283 ntBASIC23.4■■□□□ 1.34
TLR9Q9NR96 TESC-206ENST00000541210 936 ntTSL 3 BASIC23.4■■□□□ 1.34
TLR9Q9NR96 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC23.4■■□□□ 1.34
TLR9Q9NR96 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC23.4■■□□□ 1.34
TLR9Q9NR96 AC142381.3-201ENST00000568208 1670 ntBASIC23.4■■□□□ 1.34
TLR9Q9NR96 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.34
TLR9Q9NR96 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
TLR9Q9NR96 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC23.39■■□□□ 1.33
TLR9Q9NR96 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC23.39■■□□□ 1.33
TLR9Q9NR96 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
TLR9Q9NR96 AC010141.3-201ENST00000456659 717 ntBASIC23.39■■□□□ 1.33
TLR9Q9NR96 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC23.39■■□□□ 1.33
TLR9Q9NR96 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC23.39■■□□□ 1.33
TLR9Q9NR96 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC23.39■■□□□ 1.33
TLR9Q9NR96 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
TLR9Q9NR96 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC23.39■■□□□ 1.33
TLR9Q9NR96 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC23.38■■□□□ 1.33
TLR9Q9NR96 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC23.38■■□□□ 1.33
TLR9Q9NR96 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TLR9Q9NR96 ABHD17AP1-201ENST00000358206 933 ntBASIC23.38■■□□□ 1.33
TLR9Q9NR96 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TLR9Q9NR96 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC23.38■■□□□ 1.33
TLR9Q9NR96 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TLR9Q9NR96 AC011767.1-201ENST00000617410 1153 ntBASIC23.38■■□□□ 1.33
TLR9Q9NR96 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
TLR9Q9NR96 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
TLR9Q9NR96 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC23.38■■□□□ 1.33
TLR9Q9NR96 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
TLR9Q9NR96 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC23.38■■□□□ 1.33
TLR9Q9NR96 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TLR9Q9NR96 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TLR9Q9NR96 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TLR9Q9NR96 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC23.37■■□□□ 1.33
TLR9Q9NR96 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TLR9Q9NR96 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC23.37■■□□□ 1.33
TLR9Q9NR96 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
TLR9Q9NR96 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TLR9Q9NR96 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC23.37■■□□□ 1.33
TLR9Q9NR96 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
TLR9Q9NR96 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
TLR9Q9NR96 NCF1B-203ENST00000435988 1254 ntBASIC23.37■■□□□ 1.33
TLR9Q9NR96 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
TLR9Q9NR96 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC23.37■■□□□ 1.33
TLR9Q9NR96 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC23.37■■□□□ 1.33
TLR9Q9NR96 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC23.37■■□□□ 1.33
TLR9Q9NR96 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC23.36■■□□□ 1.33
TLR9Q9NR96 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC23.36■■□□□ 1.33
TLR9Q9NR96 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
TLR9Q9NR96 SPI1-203ENST00000533030 661 ntTSL 2 BASIC23.36■■□□□ 1.33
TLR9Q9NR96 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC23.36■■□□□ 1.33
TLR9Q9NR96 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TLR9Q9NR96 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TLR9Q9NR96 AC079630.1-202ENST00000618127 1840 ntBASIC23.36■■□□□ 1.33
TLR9Q9NR96 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
TLR9Q9NR96 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TLR9Q9NR96 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TLR9Q9NR96 MED17-227ENST00000640521 2047 ntTSL 5 BASIC23.35■■□□□ 1.33
TLR9Q9NR96 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
TLR9Q9NR96 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TLR9Q9NR96 MIR663A-201ENST00000385250 93 ntBASIC23.35■■□□□ 1.33
TLR9Q9NR96 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC23.35■■□□□ 1.33
TLR9Q9NR96 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC23.35■■□□□ 1.33
TLR9Q9NR96 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC23.35■■□□□ 1.33
TLR9Q9NR96 AC079140.4-201ENST00000507448 529 ntBASIC23.35■■□□□ 1.33
TLR9Q9NR96 CPT2-209ENST00000636935 803 ntTSL 5 BASIC23.35■■□□□ 1.33
TLR9Q9NR96 EED-207ENST00000528180 1745 ntTSL 5 BASIC23.35■■□□□ 1.33
TLR9Q9NR96 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TLR9Q9NR96 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
TLR9Q9NR96 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC23.34■■□□□ 1.33
TLR9Q9NR96 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC23.34■■□□□ 1.33
TLR9Q9NR96 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TLR9Q9NR96 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
TLR9Q9NR96 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC23.34■■□□□ 1.33
TLR9Q9NR96 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
TLR9Q9NR96 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC23.34■■□□□ 1.33
TLR9Q9NR96 MDK-213ENST00000617138 635 ntTSL 2 BASIC23.34■■□□□ 1.33
TLR9Q9NR96 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC23.34■■□□□ 1.33
TLR9Q9NR96 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
TLR9Q9NR96 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.33
TLR9Q9NR96 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC23.33■■□□□ 1.33
TLR9Q9NR96 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
TLR9Q9NR96 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
TLR9Q9NR96 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TLR9Q9NR96 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
TLR9Q9NR96 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms