Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 AL355802.2-201ENST00000402069 882 ntBASIC24.73■■□□□ 1.55
PDLIM7Q9NR12 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC24.73■■□□□ 1.55
PDLIM7Q9NR12 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
PDLIM7Q9NR12 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC24.73■■□□□ 1.55
PDLIM7Q9NR12 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC24.73■■□□□ 1.55
PDLIM7Q9NR12 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC24.72■■□□□ 1.55
PDLIM7Q9NR12 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
PDLIM7Q9NR12 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC24.72■■□□□ 1.55
PDLIM7Q9NR12 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
PDLIM7Q9NR12 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
PDLIM7Q9NR12 DBI-210ENST00000542275 757 ntTSL 5 BASIC24.72■■□□□ 1.55
PDLIM7Q9NR12 ANOS2P-203ENST00000472227 1816 ntBASIC24.72■■□□□ 1.55
PDLIM7Q9NR12 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC24.72■■□□□ 1.55
PDLIM7Q9NR12 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC24.71■■□□□ 1.55
PDLIM7Q9NR12 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
PDLIM7Q9NR12 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC24.71■■□□□ 1.55
PDLIM7Q9NR12 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC24.71■■□□□ 1.55
PDLIM7Q9NR12 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC24.71■■□□□ 1.55
PDLIM7Q9NR12 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC24.71■■□□□ 1.55
PDLIM7Q9NR12 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC24.71■■□□□ 1.55
PDLIM7Q9NR12 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
PDLIM7Q9NR12 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
PDLIM7Q9NR12 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
PDLIM7Q9NR12 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC24.7■■□□□ 1.55
PDLIM7Q9NR12 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC24.7■■□□□ 1.55
PDLIM7Q9NR12 AC092068.2-201ENST00000590491 1708 ntBASIC24.7■■□□□ 1.54
PDLIM7Q9NR12 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.54
PDLIM7Q9NR12 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC24.7■■□□□ 1.54
PDLIM7Q9NR12 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC24.7■■□□□ 1.54
PDLIM7Q9NR12 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC24.7■■□□□ 1.54
PDLIM7Q9NR12 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC24.7■■□□□ 1.54
PDLIM7Q9NR12 TMEM191A-211ENST00000637163 1067 ntBASIC24.7■■□□□ 1.54
PDLIM7Q9NR12 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
PDLIM7Q9NR12 AL353803.4-201ENST00000565882 1934 ntBASIC24.7■■□□□ 1.54
PDLIM7Q9NR12 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC24.69■■□□□ 1.54
PDLIM7Q9NR12 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC24.69■■□□□ 1.54
PDLIM7Q9NR12 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC24.69■■□□□ 1.54
PDLIM7Q9NR12 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC24.69■■□□□ 1.54
PDLIM7Q9NR12 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC24.69■■□□□ 1.54
PDLIM7Q9NR12 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC24.69■■□□□ 1.54
PDLIM7Q9NR12 CROCCP5-201ENST00000436658 830 ntBASIC24.69■■□□□ 1.54
PDLIM7Q9NR12 AC006970.2-201ENST00000450065 779 ntBASIC24.69■■□□□ 1.54
PDLIM7Q9NR12 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC24.69■■□□□ 1.54
PDLIM7Q9NR12 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
PDLIM7Q9NR12 AL109923.1-201ENST00000618799 583 ntBASIC24.69■■□□□ 1.54
PDLIM7Q9NR12 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC24.69■■□□□ 1.54
PDLIM7Q9NR12 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
PDLIM7Q9NR12 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC24.69■■□□□ 1.54
PDLIM7Q9NR12 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PDLIM7Q9NR12 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PDLIM7Q9NR12 BID-214ENST00000617586 542 ntTSL 5 BASIC24.68■■□□□ 1.54
PDLIM7Q9NR12 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC24.68■■□□□ 1.54
PDLIM7Q9NR12 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
PDLIM7Q9NR12 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
PDLIM7Q9NR12 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PDLIM7Q9NR12 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PDLIM7Q9NR12 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC24.67■■□□□ 1.54
PDLIM7Q9NR12 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC24.67■■□□□ 1.54
PDLIM7Q9NR12 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC24.67■■□□□ 1.54
PDLIM7Q9NR12 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC24.67■■□□□ 1.54
PDLIM7Q9NR12 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
PDLIM7Q9NR12 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
PDLIM7Q9NR12 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
PDLIM7Q9NR12 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PDLIM7Q9NR12 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
PDLIM7Q9NR12 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PDLIM7Q9NR12 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC24.67■■□□□ 1.54
PDLIM7Q9NR12 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
PDLIM7Q9NR12 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC24.66■■□□□ 1.54
PDLIM7Q9NR12 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
PDLIM7Q9NR12 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
PDLIM7Q9NR12 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC24.66■■□□□ 1.54
PDLIM7Q9NR12 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PDLIM7Q9NR12 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
PDLIM7Q9NR12 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PDLIM7Q9NR12 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC24.65■■□□□ 1.54
PDLIM7Q9NR12 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
PDLIM7Q9NR12 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PDLIM7Q9NR12 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PDLIM7Q9NR12 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PDLIM7Q9NR12 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
PDLIM7Q9NR12 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC24.65■■□□□ 1.54
PDLIM7Q9NR12 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC24.65■■□□□ 1.54
PDLIM7Q9NR12 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC24.65■■□□□ 1.54
PDLIM7Q9NR12 TPRG1LP1-201ENST00000598702 760 ntBASIC24.65■■□□□ 1.54
PDLIM7Q9NR12 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PDLIM7Q9NR12 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
PDLIM7Q9NR12 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC24.64■■□□□ 1.54
PDLIM7Q9NR12 AP004607.4-201ENST00000530158 1459 ntBASIC24.64■■□□□ 1.54
PDLIM7Q9NR12 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
PDLIM7Q9NR12 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC24.64■■□□□ 1.54
PDLIM7Q9NR12 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
PDLIM7Q9NR12 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
PDLIM7Q9NR12 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC24.64■■□□□ 1.54
PDLIM7Q9NR12 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
PDLIM7Q9NR12 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC24.64■■□□□ 1.54
PDLIM7Q9NR12 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
PDLIM7Q9NR12 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.53
PDLIM7Q9NR12 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC24.64■■□□□ 1.53
PDLIM7Q9NR12 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms