Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.64■□□□□ 0.89
NEUROD4Q9HD90 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.64■□□□□ 0.89
NEUROD4Q9HD90 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.64■□□□□ 0.89
NEUROD4Q9HD90 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.64■□□□□ 0.89
NEUROD4Q9HD90 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NEUROD4Q9HD90 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.63■□□□□ 0.89
NEUROD4Q9HD90 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
NEUROD4Q9HD90 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
NEUROD4Q9HD90 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
NEUROD4Q9HD90 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NEUROD4Q9HD90 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NEUROD4Q9HD90 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NEUROD4Q9HD90 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
NEUROD4Q9HD90 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NEUROD4Q9HD90 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NEUROD4Q9HD90 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.63■□□□□ 0.89
NEUROD4Q9HD90 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NEUROD4Q9HD90 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.63■□□□□ 0.89
NEUROD4Q9HD90 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.63■□□□□ 0.89
NEUROD4Q9HD90 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NEUROD4Q9HD90 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NEUROD4Q9HD90 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.63■□□□□ 0.89
NEUROD4Q9HD90 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
NEUROD4Q9HD90 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NEUROD4Q9HD90 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
NEUROD4Q9HD90 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.62■□□□□ 0.89
NEUROD4Q9HD90 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NEUROD4Q9HD90 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.62■□□□□ 0.89
NEUROD4Q9HD90 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
NEUROD4Q9HD90 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
NEUROD4Q9HD90 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
NEUROD4Q9HD90 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.62■□□□□ 0.89
NEUROD4Q9HD90 MIR3621-201ENST00000580529 85 ntBASIC20.62■□□□□ 0.89
NEUROD4Q9HD90 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NEUROD4Q9HD90 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NEUROD4Q9HD90 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NEUROD4Q9HD90 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NEUROD4Q9HD90 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NEUROD4Q9HD90 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NEUROD4Q9HD90 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
NEUROD4Q9HD90 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NEUROD4Q9HD90 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
NEUROD4Q9HD90 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.61■□□□□ 0.89
NEUROD4Q9HD90 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.61■□□□□ 0.89
NEUROD4Q9HD90 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NEUROD4Q9HD90 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
NEUROD4Q9HD90 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.61■□□□□ 0.89
NEUROD4Q9HD90 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
NEUROD4Q9HD90 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
NEUROD4Q9HD90 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
NEUROD4Q9HD90 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.61■□□□□ 0.89
NEUROD4Q9HD90 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
NEUROD4Q9HD90 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.61■□□□□ 0.89
NEUROD4Q9HD90 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NEUROD4Q9HD90 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
NEUROD4Q9HD90 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NEUROD4Q9HD90 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NEUROD4Q9HD90 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NEUROD4Q9HD90 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
NEUROD4Q9HD90 C11orf96-202ENST00000528572 1834 ntBASIC20.6■□□□□ 0.89
NEUROD4Q9HD90 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NEUROD4Q9HD90 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.6■□□□□ 0.89
NEUROD4Q9HD90 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NEUROD4Q9HD90 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.6■□□□□ 0.89
NEUROD4Q9HD90 CA15P2-201ENST00000611168 834 ntBASIC20.6■□□□□ 0.89
NEUROD4Q9HD90 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NEUROD4Q9HD90 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NEUROD4Q9HD90 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
NEUROD4Q9HD90 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.6■□□□□ 0.89
NEUROD4Q9HD90 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NEUROD4Q9HD90 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NEUROD4Q9HD90 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
NEUROD4Q9HD90 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.59■□□□□ 0.89
NEUROD4Q9HD90 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NEUROD4Q9HD90 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
NEUROD4Q9HD90 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NEUROD4Q9HD90 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.59■□□□□ 0.89
NEUROD4Q9HD90 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.59■□□□□ 0.89
NEUROD4Q9HD90 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NEUROD4Q9HD90 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
NEUROD4Q9HD90 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
NEUROD4Q9HD90 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
NEUROD4Q9HD90 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
NEUROD4Q9HD90 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NEUROD4Q9HD90 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NEUROD4Q9HD90 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.59■□□□□ 0.89
NEUROD4Q9HD90 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.59■□□□□ 0.89
NEUROD4Q9HD90 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.59■□□□□ 0.89
NEUROD4Q9HD90 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
NEUROD4Q9HD90 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NEUROD4Q9HD90 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NEUROD4Q9HD90 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
NEUROD4Q9HD90 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NEUROD4Q9HD90 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NEUROD4Q9HD90 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NEUROD4Q9HD90 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NEUROD4Q9HD90 AC137767.1-201ENST00000602918 1920 ntBASIC20.59■□□□□ 0.89
NEUROD4Q9HD90 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NEUROD4Q9HD90 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.58■□□□□ 0.89
NEUROD4Q9HD90 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms