Protein–RNA interactions for Protein: Q9HCI7

MSL2, E3 ubiquitin-protein ligase MSL2, humanhuman

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSL2Q9HCI7 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
MSL2Q9HCI7 AL136967.2-201ENST00000623968 743 ntBASIC18.77■□□□□ 0.6
MSL2Q9HCI7 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MSL2Q9HCI7 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
MSL2Q9HCI7 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.77■□□□□ 0.6
MSL2Q9HCI7 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
MSL2Q9HCI7 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
MSL2Q9HCI7 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MSL2Q9HCI7 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC18.76■□□□□ 0.59
MSL2Q9HCI7 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
MSL2Q9HCI7 AC027682.1-201ENST00000562846 899 ntBASIC18.76■□□□□ 0.59
MSL2Q9HCI7 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MSL2Q9HCI7 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.76■□□□□ 0.59
MSL2Q9HCI7 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
MSL2Q9HCI7 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
MSL2Q9HCI7 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC18.76■□□□□ 0.59
MSL2Q9HCI7 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
MSL2Q9HCI7 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MSL2Q9HCI7 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
MSL2Q9HCI7 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MSL2Q9HCI7 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
MSL2Q9HCI7 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MSL2Q9HCI7 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.75■□□□□ 0.59
MSL2Q9HCI7 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
MSL2Q9HCI7 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MSL2Q9HCI7 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
MSL2Q9HCI7 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
MSL2Q9HCI7 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.75■□□□□ 0.59
MSL2Q9HCI7 AC126544.1-201ENST00000580842 1059 ntBASIC18.75■□□□□ 0.59
MSL2Q9HCI7 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
MSL2Q9HCI7 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
MSL2Q9HCI7 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
MSL2Q9HCI7 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
MSL2Q9HCI7 GCA-201ENST00000233612 1694 ntTSL 2 BASIC18.75■□□□□ 0.59
MSL2Q9HCI7 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
MSL2Q9HCI7 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MSL2Q9HCI7 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
MSL2Q9HCI7 C1orf229-201ENST00000623686 2258 ntBASIC18.74■□□□□ 0.59
MSL2Q9HCI7 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
MSL2Q9HCI7 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
MSL2Q9HCI7 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
MSL2Q9HCI7 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MSL2Q9HCI7 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
MSL2Q9HCI7 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
MSL2Q9HCI7 AC091305.1-201ENST00000479476 895 ntBASIC18.74■□□□□ 0.59
MSL2Q9HCI7 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.74■□□□□ 0.59
MSL2Q9HCI7 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.74■□□□□ 0.59
MSL2Q9HCI7 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.74■□□□□ 0.59
MSL2Q9HCI7 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MSL2Q9HCI7 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC18.74■□□□□ 0.59
MSL2Q9HCI7 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MSL2Q9HCI7 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
MSL2Q9HCI7 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
MSL2Q9HCI7 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
MSL2Q9HCI7 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
MSL2Q9HCI7 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
MSL2Q9HCI7 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
MSL2Q9HCI7 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
MSL2Q9HCI7 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
MSL2Q9HCI7 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MSL2Q9HCI7 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
MSL2Q9HCI7 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MSL2Q9HCI7 RASA4CP-201ENST00000424092 1398 ntBASIC18.73■□□□□ 0.59
MSL2Q9HCI7 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
MSL2Q9HCI7 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
MSL2Q9HCI7 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MSL2Q9HCI7 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
MSL2Q9HCI7 LINC01960-201ENST00000563759 1884 ntBASIC18.73■□□□□ 0.59
MSL2Q9HCI7 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
MSL2Q9HCI7 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
MSL2Q9HCI7 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MSL2Q9HCI7 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC18.73■□□□□ 0.59
MSL2Q9HCI7 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MSL2Q9HCI7 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
MSL2Q9HCI7 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
MSL2Q9HCI7 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.72■□□□□ 0.59
MSL2Q9HCI7 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.72■□□□□ 0.59
MSL2Q9HCI7 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MSL2Q9HCI7 CA15P2-201ENST00000611168 834 ntBASIC18.72■□□□□ 0.59
MSL2Q9HCI7 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MSL2Q9HCI7 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
MSL2Q9HCI7 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
MSL2Q9HCI7 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MSL2Q9HCI7 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC18.72■□□□□ 0.59
MSL2Q9HCI7 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
MSL2Q9HCI7 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
MSL2Q9HCI7 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MSL2Q9HCI7 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MSL2Q9HCI7 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
MSL2Q9HCI7 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
MSL2Q9HCI7 AC133561.1-201ENST00000568600 2415 ntBASIC18.71■□□□□ 0.59
MSL2Q9HCI7 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.71■□□□□ 0.59
MSL2Q9HCI7 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.71■□□□□ 0.59
MSL2Q9HCI7 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
MSL2Q9HCI7 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MSL2Q9HCI7 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.71■□□□□ 0.59
MSL2Q9HCI7 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.71■□□□□ 0.59
MSL2Q9HCI7 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
MSL2Q9HCI7 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MSL2Q9HCI7 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms