Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
CCDC68Q9H2F9 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCDC68Q9H2F9 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCDC68Q9H2F9 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCDC68Q9H2F9 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.86■■□□□ 1.09
CCDC68Q9H2F9 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.86■■□□□ 1.09
CCDC68Q9H2F9 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.86■■□□□ 1.09
CCDC68Q9H2F9 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CCDC68Q9H2F9 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCDC68Q9H2F9 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCDC68Q9H2F9 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCDC68Q9H2F9 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CCDC68Q9H2F9 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.85■■□□□ 1.09
CCDC68Q9H2F9 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.85■■□□□ 1.09
CCDC68Q9H2F9 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC68Q9H2F9 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC68Q9H2F9 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC68Q9H2F9 SRD5A1P1-201ENST00000442297 786 ntBASIC21.85■■□□□ 1.09
CCDC68Q9H2F9 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.85■■□□□ 1.09
CCDC68Q9H2F9 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.85■■□□□ 1.09
CCDC68Q9H2F9 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC68Q9H2F9 LINC01960-201ENST00000563759 1884 ntBASIC21.85■■□□□ 1.09
CCDC68Q9H2F9 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC68Q9H2F9 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.85■■□□□ 1.09
CCDC68Q9H2F9 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC68Q9H2F9 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
CCDC68Q9H2F9 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC68Q9H2F9 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC68Q9H2F9 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
CCDC68Q9H2F9 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC68Q9H2F9 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.84■■□□□ 1.09
CCDC68Q9H2F9 AC242852.2-201ENST00000615738 1807 ntBASIC21.84■■□□□ 1.09
CCDC68Q9H2F9 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC68Q9H2F9 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC68Q9H2F9 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
CCDC68Q9H2F9 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
CCDC68Q9H2F9 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC68Q9H2F9 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC68Q9H2F9 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC68Q9H2F9 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
CCDC68Q9H2F9 AL499627.2-201ENST00000606283 725 ntBASIC21.83■■□□□ 1.09
CCDC68Q9H2F9 AC092171.4-201ENST00000609130 632 ntBASIC21.83■■□□□ 1.09
CCDC68Q9H2F9 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC68Q9H2F9 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
CCDC68Q9H2F9 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
CCDC68Q9H2F9 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.83■■□□□ 1.08
CCDC68Q9H2F9 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.83■■□□□ 1.08
CCDC68Q9H2F9 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CCDC68Q9H2F9 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
CCDC68Q9H2F9 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC68Q9H2F9 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
CCDC68Q9H2F9 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC68Q9H2F9 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC68Q9H2F9 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.82■■□□□ 1.08
CCDC68Q9H2F9 AC099791.2-201ENST00000605725 427 ntBASIC21.82■■□□□ 1.08
CCDC68Q9H2F9 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.82■■□□□ 1.08
CCDC68Q9H2F9 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.82■■□□□ 1.08
CCDC68Q9H2F9 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC68Q9H2F9 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC68Q9H2F9 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC68Q9H2F9 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.81■■□□□ 1.08
CCDC68Q9H2F9 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC68Q9H2F9 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.81■■□□□ 1.08
CCDC68Q9H2F9 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.81■■□□□ 1.08
CCDC68Q9H2F9 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC68Q9H2F9 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC68Q9H2F9 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC68Q9H2F9 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC68Q9H2F9 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CCDC68Q9H2F9 ECEL1P1-201ENST00000373592 1742 ntBASIC21.8■■□□□ 1.08
CCDC68Q9H2F9 AC087742.1-201ENST00000575880 1738 ntBASIC21.8■■□□□ 1.08
CCDC68Q9H2F9 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC68Q9H2F9 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.8■■□□□ 1.08
CCDC68Q9H2F9 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.8■■□□□ 1.08
CCDC68Q9H2F9 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
CCDC68Q9H2F9 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CCDC68Q9H2F9 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC68Q9H2F9 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC68Q9H2F9 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC68Q9H2F9 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC68Q9H2F9 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.79■■□□□ 1.08
CCDC68Q9H2F9 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC68Q9H2F9 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC68Q9H2F9 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC68Q9H2F9 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.79■■□□□ 1.08
CCDC68Q9H2F9 pRNA.6-201ENST00000610482 90 ntBASIC21.79■■□□□ 1.08
CCDC68Q9H2F9 pRNA.5-201ENST00000612139 90 ntBASIC21.79■■□□□ 1.08
CCDC68Q9H2F9 pRNA.11-201ENST00000618423 90 ntBASIC21.79■■□□□ 1.08
CCDC68Q9H2F9 pRNA.13-201ENST00000619112 90 ntBASIC21.79■■□□□ 1.08
CCDC68Q9H2F9 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC68Q9H2F9 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
CCDC68Q9H2F9 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC68Q9H2F9 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC68Q9H2F9 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.79■■□□□ 1.08
CCDC68Q9H2F9 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC68Q9H2F9 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC68Q9H2F9 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC68Q9H2F9 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC68Q9H2F9 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC68Q9H2F9 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms