Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.2■□□□□ 0.82
POLR2J3Q9H1A7 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.2■□□□□ 0.82
POLR2J3Q9H1A7 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.2■□□□□ 0.82
POLR2J3Q9H1A7 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
POLR2J3Q9H1A7 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.2■□□□□ 0.82
POLR2J3Q9H1A7 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
POLR2J3Q9H1A7 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
POLR2J3Q9H1A7 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
POLR2J3Q9H1A7 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
POLR2J3Q9H1A7 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
POLR2J3Q9H1A7 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
POLR2J3Q9H1A7 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.19■□□□□ 0.82
POLR2J3Q9H1A7 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.19■□□□□ 0.82
POLR2J3Q9H1A7 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
POLR2J3Q9H1A7 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
POLR2J3Q9H1A7 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
POLR2J3Q9H1A7 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
POLR2J3Q9H1A7 MIR4787-201ENST00000607364 84 ntBASIC20.19■□□□□ 0.82
POLR2J3Q9H1A7 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
POLR2J3Q9H1A7 AC009102.2-201ENST00000606772 1639 ntBASIC20.19■□□□□ 0.82
POLR2J3Q9H1A7 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
POLR2J3Q9H1A7 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
POLR2J3Q9H1A7 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.19■□□□□ 0.82
POLR2J3Q9H1A7 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
POLR2J3Q9H1A7 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
POLR2J3Q9H1A7 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
POLR2J3Q9H1A7 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
POLR2J3Q9H1A7 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.18■□□□□ 0.82
POLR2J3Q9H1A7 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.18■□□□□ 0.82
POLR2J3Q9H1A7 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
POLR2J3Q9H1A7 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
POLR2J3Q9H1A7 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.18■□□□□ 0.82
POLR2J3Q9H1A7 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
POLR2J3Q9H1A7 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
POLR2J3Q9H1A7 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
POLR2J3Q9H1A7 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
POLR2J3Q9H1A7 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
POLR2J3Q9H1A7 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
POLR2J3Q9H1A7 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
POLR2J3Q9H1A7 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
POLR2J3Q9H1A7 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
POLR2J3Q9H1A7 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.17■□□□□ 0.82
POLR2J3Q9H1A7 FBXW4P1-201ENST00000426721 2239 ntBASIC20.17■□□□□ 0.82
POLR2J3Q9H1A7 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
POLR2J3Q9H1A7 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.17■□□□□ 0.82
POLR2J3Q9H1A7 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
POLR2J3Q9H1A7 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
POLR2J3Q9H1A7 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
POLR2J3Q9H1A7 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.17■□□□□ 0.82
POLR2J3Q9H1A7 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
POLR2J3Q9H1A7 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
POLR2J3Q9H1A7 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
POLR2J3Q9H1A7 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
POLR2J3Q9H1A7 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
POLR2J3Q9H1A7 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.17■□□□□ 0.82
POLR2J3Q9H1A7 AL137060.1-201ENST00000618151 2648 ntBASIC20.17■□□□□ 0.82
POLR2J3Q9H1A7 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
POLR2J3Q9H1A7 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.17■□□□□ 0.82
POLR2J3Q9H1A7 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.16■□□□□ 0.82
POLR2J3Q9H1A7 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
POLR2J3Q9H1A7 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
POLR2J3Q9H1A7 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
POLR2J3Q9H1A7 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
POLR2J3Q9H1A7 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
POLR2J3Q9H1A7 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
POLR2J3Q9H1A7 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
POLR2J3Q9H1A7 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
POLR2J3Q9H1A7 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.16■□□□□ 0.82
POLR2J3Q9H1A7 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
POLR2J3Q9H1A7 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
POLR2J3Q9H1A7 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
POLR2J3Q9H1A7 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.16■□□□□ 0.82
POLR2J3Q9H1A7 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
POLR2J3Q9H1A7 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
POLR2J3Q9H1A7 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.16■□□□□ 0.82
POLR2J3Q9H1A7 LINC01960-201ENST00000563759 1884 ntBASIC20.16■□□□□ 0.82
POLR2J3Q9H1A7 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.15■□□□□ 0.82
POLR2J3Q9H1A7 AC010997.5-201ENST00000609182 354 ntBASIC20.15■□□□□ 0.82
POLR2J3Q9H1A7 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
POLR2J3Q9H1A7 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
POLR2J3Q9H1A7 C17orf82-201ENST00000623772 1530 ntBASIC20.15■□□□□ 0.82
POLR2J3Q9H1A7 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.15■□□□□ 0.82
POLR2J3Q9H1A7 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
POLR2J3Q9H1A7 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
POLR2J3Q9H1A7 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
POLR2J3Q9H1A7 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
POLR2J3Q9H1A7 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
POLR2J3Q9H1A7 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
POLR2J3Q9H1A7 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
POLR2J3Q9H1A7 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
POLR2J3Q9H1A7 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.81
POLR2J3Q9H1A7 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
POLR2J3Q9H1A7 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.14■□□□□ 0.81
POLR2J3Q9H1A7 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
POLR2J3Q9H1A7 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.13■□□□□ 0.81
POLR2J3Q9H1A7 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.13■□□□□ 0.81
POLR2J3Q9H1A7 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
POLR2J3Q9H1A7 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.13■□□□□ 0.81
POLR2J3Q9H1A7 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
POLR2J3Q9H1A7 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms