Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
DDX47Q9H0S4 AC103834.1-201ENST00000520383 144 ntBASIC22.8■■□□□ 1.24
DDX47Q9H0S4 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC22.8■■□□□ 1.24
DDX47Q9H0S4 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC22.8■■□□□ 1.24
DDX47Q9H0S4 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
DDX47Q9H0S4 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC22.8■■□□□ 1.24
DDX47Q9H0S4 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
DDX47Q9H0S4 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
DDX47Q9H0S4 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC22.79■■□□□ 1.24
DDX47Q9H0S4 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC22.79■■□□□ 1.24
DDX47Q9H0S4 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
DDX47Q9H0S4 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
DDX47Q9H0S4 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
DDX47Q9H0S4 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
DDX47Q9H0S4 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC22.78■■□□□ 1.24
DDX47Q9H0S4 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC22.78■■□□□ 1.24
DDX47Q9H0S4 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
DDX47Q9H0S4 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC22.78■■□□□ 1.24
DDX47Q9H0S4 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC22.78■■□□□ 1.24
DDX47Q9H0S4 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
DDX47Q9H0S4 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC22.78■■□□□ 1.24
DDX47Q9H0S4 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
DDX47Q9H0S4 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC22.78■■□□□ 1.24
DDX47Q9H0S4 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
DDX47Q9H0S4 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC22.78■■□□□ 1.24
DDX47Q9H0S4 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
DDX47Q9H0S4 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC22.77■■□□□ 1.24
DDX47Q9H0S4 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC22.77■■□□□ 1.24
DDX47Q9H0S4 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC22.77■■□□□ 1.24
DDX47Q9H0S4 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
DDX47Q9H0S4 AC005229.4-201ENST00000610085 2198 ntBASIC22.77■■□□□ 1.24
DDX47Q9H0S4 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
DDX47Q9H0S4 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
DDX47Q9H0S4 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
DDX47Q9H0S4 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC22.77■■□□□ 1.24
DDX47Q9H0S4 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC22.77■■□□□ 1.23
DDX47Q9H0S4 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC22.77■■□□□ 1.23
DDX47Q9H0S4 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC22.76■■□□□ 1.23
DDX47Q9H0S4 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
DDX47Q9H0S4 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
DDX47Q9H0S4 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
DDX47Q9H0S4 AC103724.3-201ENST00000564481 992 ntBASIC22.76■■□□□ 1.23
DDX47Q9H0S4 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
DDX47Q9H0S4 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
DDX47Q9H0S4 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC22.76■■□□□ 1.23
DDX47Q9H0S4 AC005703.6-201ENST00000623265 1329 ntBASIC22.76■■□□□ 1.23
DDX47Q9H0S4 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
DDX47Q9H0S4 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
DDX47Q9H0S4 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
DDX47Q9H0S4 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
DDX47Q9H0S4 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC22.75■■□□□ 1.23
DDX47Q9H0S4 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
DDX47Q9H0S4 AC137630.3-201ENST00000607245 391 ntBASIC22.75■■□□□ 1.23
DDX47Q9H0S4 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
DDX47Q9H0S4 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC22.75■■□□□ 1.23
DDX47Q9H0S4 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
DDX47Q9H0S4 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
DDX47Q9H0S4 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
DDX47Q9H0S4 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
DDX47Q9H0S4 KRT8P33-201ENST00000508125 1423 ntBASIC22.74■■□□□ 1.23
DDX47Q9H0S4 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
DDX47Q9H0S4 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC22.74■■□□□ 1.23
DDX47Q9H0S4 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
DDX47Q9H0S4 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC22.74■■□□□ 1.23
DDX47Q9H0S4 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC22.74■■□□□ 1.23
DDX47Q9H0S4 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
DDX47Q9H0S4 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
DDX47Q9H0S4 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
DDX47Q9H0S4 AC009086.3-201ENST00000623486 1008 ntBASIC22.74■■□□□ 1.23
DDX47Q9H0S4 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC22.74■■□□□ 1.23
DDX47Q9H0S4 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
DDX47Q9H0S4 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
DDX47Q9H0S4 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
DDX47Q9H0S4 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC22.73■■□□□ 1.23
DDX47Q9H0S4 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
DDX47Q9H0S4 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC22.73■■□□□ 1.23
DDX47Q9H0S4 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC22.73■■□□□ 1.23
DDX47Q9H0S4 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC22.73■■□□□ 1.23
DDX47Q9H0S4 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.23
DDX47Q9H0S4 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC22.73■■□□□ 1.23
DDX47Q9H0S4 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC22.73■■□□□ 1.23
DDX47Q9H0S4 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC22.73■■□□□ 1.23
DDX47Q9H0S4 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC22.73■■□□□ 1.23
DDX47Q9H0S4 CLTA-210ENST00000540080 989 ntTSL 2 BASIC22.73■■□□□ 1.23
DDX47Q9H0S4 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
DDX47Q9H0S4 DUX4L4-201ENST00000566884 1269 ntBASIC22.73■■□□□ 1.23
DDX47Q9H0S4 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC22.73■■□□□ 1.23
DDX47Q9H0S4 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC22.73■■□□□ 1.23
DDX47Q9H0S4 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
DDX47Q9H0S4 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
DDX47Q9H0S4 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
DDX47Q9H0S4 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC22.73■■□□□ 1.23
DDX47Q9H0S4 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
DDX47Q9H0S4 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
DDX47Q9H0S4 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
DDX47Q9H0S4 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC22.72■■□□□ 1.23
DDX47Q9H0S4 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
DDX47Q9H0S4 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
DDX47Q9H0S4 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC22.72■■□□□ 1.23
DDX47Q9H0S4 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC22.72■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms