Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAF4Q9BUZ4 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.47■□□□□ 0.71
TRAF4Q9BUZ4 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRAF4Q9BUZ4 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAF4Q9BUZ4 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.47■□□□□ 0.71
TRAF4Q9BUZ4 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAF4Q9BUZ4 AC009102.2-201ENST00000606772 1639 ntBASIC19.47■□□□□ 0.71
TRAF4Q9BUZ4 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAF4Q9BUZ4 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAF4Q9BUZ4 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAF4Q9BUZ4 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRAF4Q9BUZ4 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
TRAF4Q9BUZ4 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAF4Q9BUZ4 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAF4Q9BUZ4 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.46■□□□□ 0.71
TRAF4Q9BUZ4 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAF4Q9BUZ4 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRAF4Q9BUZ4 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRAF4Q9BUZ4 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
TRAF4Q9BUZ4 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.46■□□□□ 0.71
TRAF4Q9BUZ4 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.46■□□□□ 0.71
TRAF4Q9BUZ4 AF213884.3-201ENST00000563833 479 ntBASIC19.46■□□□□ 0.71
TRAF4Q9BUZ4 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
TRAF4Q9BUZ4 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.46■□□□□ 0.71
TRAF4Q9BUZ4 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
TRAF4Q9BUZ4 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAF4Q9BUZ4 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.46■□□□□ 0.71
TRAF4Q9BUZ4 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAF4Q9BUZ4 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
TRAF4Q9BUZ4 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.46■□□□□ 0.71
TRAF4Q9BUZ4 AC242852.2-201ENST00000615738 1807 ntBASIC19.46■□□□□ 0.71
TRAF4Q9BUZ4 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
TRAF4Q9BUZ4 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRAF4Q9BUZ4 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.46■□□□□ 0.71
TRAF4Q9BUZ4 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.45■□□□□ 0.7
TRAF4Q9BUZ4 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAF4Q9BUZ4 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAF4Q9BUZ4 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAF4Q9BUZ4 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.45■□□□□ 0.7
TRAF4Q9BUZ4 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
TRAF4Q9BUZ4 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.45■□□□□ 0.7
TRAF4Q9BUZ4 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
TRAF4Q9BUZ4 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
TRAF4Q9BUZ4 AC099791.2-201ENST00000605725 427 ntBASIC19.45■□□□□ 0.7
TRAF4Q9BUZ4 AL136967.2-201ENST00000623968 743 ntBASIC19.45■□□□□ 0.7
TRAF4Q9BUZ4 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
TRAF4Q9BUZ4 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
TRAF4Q9BUZ4 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAF4Q9BUZ4 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAF4Q9BUZ4 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
TRAF4Q9BUZ4 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.44■□□□□ 0.7
TRAF4Q9BUZ4 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAF4Q9BUZ4 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAF4Q9BUZ4 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAF4Q9BUZ4 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAF4Q9BUZ4 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAF4Q9BUZ4 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.44■□□□□ 0.7
TRAF4Q9BUZ4 SERBP1P1-201ENST00000396021 1160 ntBASIC19.44■□□□□ 0.7
TRAF4Q9BUZ4 MIR939-201ENST00000401314 82 ntBASIC19.44■□□□□ 0.7
TRAF4Q9BUZ4 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAF4Q9BUZ4 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.44■□□□□ 0.7
TRAF4Q9BUZ4 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.44■□□□□ 0.7
TRAF4Q9BUZ4 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.44■□□□□ 0.7
TRAF4Q9BUZ4 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAF4Q9BUZ4 MIR4767-201ENST00000582827 78 ntBASIC19.44■□□□□ 0.7
TRAF4Q9BUZ4 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.44■□□□□ 0.7
TRAF4Q9BUZ4 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRAF4Q9BUZ4 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRAF4Q9BUZ4 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRAF4Q9BUZ4 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRAF4Q9BUZ4 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRAF4Q9BUZ4 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAF4Q9BUZ4 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
TRAF4Q9BUZ4 AL161729.1-201ENST00000604104 1402 ntBASIC19.43■□□□□ 0.7
TRAF4Q9BUZ4 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAF4Q9BUZ4 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAF4Q9BUZ4 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAF4Q9BUZ4 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.43■□□□□ 0.7
TRAF4Q9BUZ4 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRAF4Q9BUZ4 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRAF4Q9BUZ4 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.43■□□□□ 0.7
TRAF4Q9BUZ4 AP001330.3-201ENST00000520123 633 ntBASIC19.43■□□□□ 0.7
TRAF4Q9BUZ4 RARRES2P6-201ENST00000567333 442 ntBASIC19.43■□□□□ 0.7
TRAF4Q9BUZ4 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRAF4Q9BUZ4 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAF4Q9BUZ4 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAF4Q9BUZ4 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAF4Q9BUZ4 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAF4Q9BUZ4 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAF4Q9BUZ4 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
TRAF4Q9BUZ4 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.42■□□□□ 0.7
TRAF4Q9BUZ4 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAF4Q9BUZ4 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAF4Q9BUZ4 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
TRAF4Q9BUZ4 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAF4Q9BUZ4 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.42■□□□□ 0.7
TRAF4Q9BUZ4 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
TRAF4Q9BUZ4 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.42■□□□□ 0.7
TRAF4Q9BUZ4 AC105265.2-201ENST00000467189 838 ntBASIC19.42■□□□□ 0.7
TRAF4Q9BUZ4 AL138724.1-201ENST00000606771 1088 ntBASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms