Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LIMD2Q9BT23 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LIMD2Q9BT23 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC12.94□□□□□ -0.34
LIMD2Q9BT23 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
LIMD2Q9BT23 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC12.94□□□□□ -0.34
LIMD2Q9BT23 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LIMD2Q9BT23 SENP5-202ENST00000419026 973 ntTSL 3 BASIC12.94□□□□□ -0.34
LIMD2Q9BT23 RARRES2P1-201ENST00000474487 481 ntBASIC12.94□□□□□ -0.34
LIMD2Q9BT23 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
LIMD2Q9BT23 USF2-207ENST00000595068 1612 ntTSL 5 BASIC12.94□□□□□ -0.34
LIMD2Q9BT23 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LIMD2Q9BT23 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LIMD2Q9BT23 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
LIMD2Q9BT23 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC12.94□□□□□ -0.34
LIMD2Q9BT23 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LIMD2Q9BT23 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LIMD2Q9BT23 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
LIMD2Q9BT23 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LIMD2Q9BT23 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
LIMD2Q9BT23 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LIMD2Q9BT23 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
LIMD2Q9BT23 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LIMD2Q9BT23 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LIMD2Q9BT23 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC12.93□□□□□ -0.34
LIMD2Q9BT23 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
LIMD2Q9BT23 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
LIMD2Q9BT23 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LIMD2Q9BT23 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC12.93□□□□□ -0.34
LIMD2Q9BT23 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LIMD2Q9BT23 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LIMD2Q9BT23 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC12.93□□□□□ -0.34
LIMD2Q9BT23 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC12.93□□□□□ -0.34
LIMD2Q9BT23 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
LIMD2Q9BT23 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
LIMD2Q9BT23 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
LIMD2Q9BT23 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LIMD2Q9BT23 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
LIMD2Q9BT23 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LIMD2Q9BT23 DUSP8P3-201ENST00000399571 1760 ntBASIC12.92□□□□□ -0.34
LIMD2Q9BT23 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LIMD2Q9BT23 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LIMD2Q9BT23 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
LIMD2Q9BT23 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
LIMD2Q9BT23 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LIMD2Q9BT23 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LIMD2Q9BT23 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
LIMD2Q9BT23 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LIMD2Q9BT23 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LIMD2Q9BT23 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
LIMD2Q9BT23 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LIMD2Q9BT23 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
LIMD2Q9BT23 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LIMD2Q9BT23 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC12.92□□□□□ -0.34
LIMD2Q9BT23 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
LIMD2Q9BT23 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LIMD2Q9BT23 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
LIMD2Q9BT23 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
LIMD2Q9BT23 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC12.91□□□□□ -0.34
LIMD2Q9BT23 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LIMD2Q9BT23 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
LIMD2Q9BT23 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC12.91□□□□□ -0.34
LIMD2Q9BT23 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LIMD2Q9BT23 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
LIMD2Q9BT23 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LIMD2Q9BT23 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC12.91□□□□□ -0.34
LIMD2Q9BT23 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LIMD2Q9BT23 TFPT-201ENST00000391757 774 ntTSL 5 BASIC12.91□□□□□ -0.34
LIMD2Q9BT23 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
LIMD2Q9BT23 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
LIMD2Q9BT23 AC239859.2-201ENST00000444165 318 ntBASIC12.91□□□□□ -0.34
LIMD2Q9BT23 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LIMD2Q9BT23 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LIMD2Q9BT23 AC010997.5-201ENST00000609182 354 ntBASIC12.91□□□□□ -0.34
LIMD2Q9BT23 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LIMD2Q9BT23 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LIMD2Q9BT23 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LIMD2Q9BT23 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC12.91□□□□□ -0.34
LIMD2Q9BT23 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LIMD2Q9BT23 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LIMD2Q9BT23 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LIMD2Q9BT23 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LIMD2Q9BT23 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
LIMD2Q9BT23 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LIMD2Q9BT23 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC12.91□□□□□ -0.34
LIMD2Q9BT23 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC12.91□□□□□ -0.34
LIMD2Q9BT23 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
LIMD2Q9BT23 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LIMD2Q9BT23 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
LIMD2Q9BT23 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LIMD2Q9BT23 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
LIMD2Q9BT23 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LIMD2Q9BT23 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LIMD2Q9BT23 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LIMD2Q9BT23 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LIMD2Q9BT23 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC12.9□□□□□ -0.34
LIMD2Q9BT23 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC12.9□□□□□ -0.34
LIMD2Q9BT23 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
LIMD2Q9BT23 TSPY9P-201ENST00000440215 945 ntBASIC12.9□□□□□ -0.34
LIMD2Q9BT23 TSPY11P-201ENST00000442607 1045 ntBASIC12.9□□□□□ -0.34
LIMD2Q9BT23 AC009299.2-201ENST00000482477 511 ntBASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms