Protein–RNA interactions for Protein: Q99959

PKP2, Plakophilin-2, humanhuman

Predictions only

Length 881 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2Q99959 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PKP2Q99959 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
PKP2Q99959 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
PKP2Q99959 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.59■□□□□ 0.89
PKP2Q99959 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PKP2Q99959 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
PKP2Q99959 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.59■□□□□ 0.89
PKP2Q99959 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
PKP2Q99959 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PKP2Q99959 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
PKP2Q99959 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.58■□□□□ 0.89
PKP2Q99959 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PKP2Q99959 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.58■□□□□ 0.89
PKP2Q99959 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
PKP2Q99959 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PKP2Q99959 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
PKP2Q99959 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PKP2Q99959 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.88
PKP2Q99959 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
PKP2Q99959 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
PKP2Q99959 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.58■□□□□ 0.88
PKP2Q99959 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PKP2Q99959 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PKP2Q99959 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PKP2Q99959 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PKP2Q99959 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PKP2Q99959 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.57■□□□□ 0.88
PKP2Q99959 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PKP2Q99959 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.57■□□□□ 0.88
PKP2Q99959 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.57■□□□□ 0.88
PKP2Q99959 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.57■□□□□ 0.88
PKP2Q99959 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.56■□□□□ 0.88
PKP2Q99959 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PKP2Q99959 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.56■□□□□ 0.88
PKP2Q99959 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PKP2Q99959 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PKP2Q99959 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.56■□□□□ 0.88
PKP2Q99959 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
PKP2Q99959 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
PKP2Q99959 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.56■□□□□ 0.88
PKP2Q99959 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PKP2Q99959 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PKP2Q99959 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PKP2Q99959 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.56■□□□□ 0.88
PKP2Q99959 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
PKP2Q99959 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.56■□□□□ 0.88
PKP2Q99959 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PKP2Q99959 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PKP2Q99959 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PKP2Q99959 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.55■□□□□ 0.88
PKP2Q99959 AC133552.2-201ENST00000619106 1032 ntBASIC20.55■□□□□ 0.88
PKP2Q99959 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
PKP2Q99959 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PKP2Q99959 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.55■□□□□ 0.88
PKP2Q99959 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
PKP2Q99959 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PKP2Q99959 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PKP2Q99959 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.55■□□□□ 0.88
PKP2Q99959 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
PKP2Q99959 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PKP2Q99959 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PKP2Q99959 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.54■□□□□ 0.88
PKP2Q99959 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
PKP2Q99959 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.54■□□□□ 0.88
PKP2Q99959 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PKP2Q99959 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PKP2Q99959 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PKP2Q99959 Z98882.1-201ENST00000622160 2253 ntBASIC20.54■□□□□ 0.88
PKP2Q99959 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.54■□□□□ 0.88
PKP2Q99959 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PKP2Q99959 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PKP2Q99959 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PKP2Q99959 FEM1AP4-201ENST00000443167 1987 ntBASIC20.54■□□□□ 0.88
PKP2Q99959 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.54■□□□□ 0.88
PKP2Q99959 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PKP2Q99959 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PKP2Q99959 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PKP2Q99959 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PKP2Q99959 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.53■□□□□ 0.88
PKP2Q99959 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
PKP2Q99959 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PKP2Q99959 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PKP2Q99959 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PKP2Q99959 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PKP2Q99959 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.53■□□□□ 0.88
PKP2Q99959 AC011551.1-201ENST00000614101 683 ntBASIC20.53■□□□□ 0.88
PKP2Q99959 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PKP2Q99959 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PKP2Q99959 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PKP2Q99959 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
PKP2Q99959 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PKP2Q99959 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.53■□□□□ 0.88
PKP2Q99959 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
PKP2Q99959 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
PKP2Q99959 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.53■□□□□ 0.88
PKP2Q99959 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PKP2Q99959 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PKP2Q99959 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.52■□□□□ 0.88
PKP2Q99959 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.52■□□□□ 0.88
PKP2Q99959 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms